Gene : Phvul.008G208700 P. vulgaris v2.1
Defline:  (1 of 1) K10258 - very-long-chain enoyl-CoA reductase (TER, TSC13, CER10) Genomic Order:  2128
Name:  ? Phvul.008G208700 Secondary Identifier:  ? PAC:37160446
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Sequence Feature Displayer

Ontology Annotation Displayer

8 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-5080 Phaseolus vulgaris pathologic  
Pvulgaris PWY-6433 Phaseolus vulgaris pathologic  
Pvulgaris PWY-6598 Phaseolus vulgaris pathologic  
Pvulgaris PWY66-389 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7036 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7601 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7606 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7619 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G208700 0.5kb upstream 0.5kb upstream 3875 true Chr08: 55629418-55633292 Phaseolus vulgaris
Phvul.008G208700 0.5kb upstream 0.5kb upstream 500 false Chr08: 55629418-55629917 Phaseolus vulgaris
Phvul.008G208700 0.5kb downstream 0.5kb downstream 3875 true Chr08: 55629918-55633792 Phaseolus vulgaris
Phvul.008G208700 0.5kb downstream 0.5kb downstream 500 false Chr08: 55633293-55633792 Phaseolus vulgaris
Phvul.008G208700 1.0kb upstream 1.0kb upstream 4375 true Chr08: 55628918-55633292 Phaseolus vulgaris
Phvul.008G208700 1.0kb upstream 1.0kb upstream 1000 false Chr08: 55628918-55629917 Phaseolus vulgaris
Phvul.008G208700 1.0kb downstream 1.0kb downstream 4375 true Chr08: 55629918-55634292 Phaseolus vulgaris
Phvul.008G208700 1.0kb downstream 1.0kb downstream 1000 false Chr08: 55633293-55634292 Phaseolus vulgaris
Phvul.008G208700 2.0kb upstream 2.0kb upstream 5375 true Chr08: 55627918-55633292 Phaseolus vulgaris
Phvul.008G208700 2.0kb upstream 2.0kb upstream 2000 false Chr08: 55627918-55629917 Phaseolus vulgaris
Phvul.008G208700 2.0kb downstream 2.0kb downstream 5375 true Chr08: 55629918-55635292 Phaseolus vulgaris
Phvul.008G208700 2.0kb downstream 2.0kb downstream 2000 false Chr08: 55633293-55635292 Phaseolus vulgaris
Phvul.008G208700 5.0kb upstream 5.0kb upstream 8375 true Chr08: 55624918-55633292 Phaseolus vulgaris
Phvul.008G208700 5.0kb upstream 5.0kb upstream 5000 false Chr08: 55624918-55629917 Phaseolus vulgaris
Phvul.008G208700 5.0kb downstream 5.0kb downstream 8375 true Chr08: 55629918-55638292 Phaseolus vulgaris
Phvul.008G208700 5.0kb downstream 5.0kb downstream 5000 false Chr08: 55633293-55638292 Phaseolus vulgaris
Phvul.008G208700 10.0kb upstream 10.0kb upstream 13375 true Chr08: 55619918-55633292 Phaseolus vulgaris
Phvul.008G208700 10.0kb upstream 10.0kb upstream 10000 false Chr08: 55619918-55629917 Phaseolus vulgaris
Phvul.008G208700 10.0kb downstream 10.0kb downstream 13375 true Chr08: 55629918-55643292 Phaseolus vulgaris
Phvul.008G208700 10.0kb downstream 10.0kb downstream 10000 false Chr08: 55633293-55643292 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301303 5265 Fabidae View MSA
124066055 5270 Rosid View MSA
123738420 5271 Pentapetalae View MSA
122787535 5272 Eudicot View MSA
122041851 5273 Angiosperm View MSA
121344061 5274 Embryophyte View MSA
123428210 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.7186 0.0 62.2276   Low
cufflinks 24.9788 0.0 80.6481    
cufflinks 43.4544 0.0 137.648 High  
cufflinks 84.0467 0.0 282.801 High High
cufflinks 26.1171 0.0 83.9262    
cufflinks 46.1653 0.0 146.401 High  
cufflinks 20.853 0.0 68.7211    
cufflinks 23.5614 0.0 76.2651    
cufflinks 31.2024 0.0 99.3737 High  
cufflinks 16.3134 0.0 55.7289   Low
cufflinks 42.0543 0.0 132.899 High  

0 Strain