Gene : Phvul.008G208300 P. vulgaris v2.1
Defline:  (1 of 2) PTHR31669:SF45 - PROTEIN FAR1-RELATED SEQUENCE 3 Genomic Order:  2124
Name:  ? Phvul.008G208300 Secondary Identifier:  ? PAC:37159278
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G208300 0.5kb upstream 0.5kb upstream 6063 true Chr08: 55593116-55599178 Phaseolus vulgaris
Phvul.008G208300 0.5kb upstream 0.5kb upstream 500 false Chr08: 55593116-55593615 Phaseolus vulgaris
Phvul.008G208300 0.5kb downstream 0.5kb downstream 6063 true Chr08: 55593616-55599678 Phaseolus vulgaris
Phvul.008G208300 0.5kb downstream 0.5kb downstream 500 false Chr08: 55599179-55599678 Phaseolus vulgaris
Phvul.008G208300 1.0kb upstream 1.0kb upstream 6563 true Chr08: 55592616-55599178 Phaseolus vulgaris
Phvul.008G208300 1.0kb upstream 1.0kb upstream 1000 false Chr08: 55592616-55593615 Phaseolus vulgaris
Phvul.008G208300 1.0kb downstream 1.0kb downstream 6563 true Chr08: 55593616-55600178 Phaseolus vulgaris
Phvul.008G208300 1.0kb downstream 1.0kb downstream 1000 false Chr08: 55599179-55600178 Phaseolus vulgaris
Phvul.008G208300 2.0kb upstream 2.0kb upstream 7563 true Chr08: 55591616-55599178 Phaseolus vulgaris
Phvul.008G208300 2.0kb upstream 2.0kb upstream 2000 false Chr08: 55591616-55593615 Phaseolus vulgaris
Phvul.008G208300 2.0kb downstream 2.0kb downstream 7563 true Chr08: 55593616-55601178 Phaseolus vulgaris
Phvul.008G208300 2.0kb downstream 2.0kb downstream 2000 false Chr08: 55599179-55601178 Phaseolus vulgaris
Phvul.008G208300 5.0kb upstream 5.0kb upstream 10563 true Chr08: 55588616-55599178 Phaseolus vulgaris
Phvul.008G208300 5.0kb upstream 5.0kb upstream 5000 false Chr08: 55588616-55593615 Phaseolus vulgaris
Phvul.008G208300 5.0kb downstream 5.0kb downstream 10563 true Chr08: 55593616-55604178 Phaseolus vulgaris
Phvul.008G208300 5.0kb downstream 5.0kb downstream 5000 false Chr08: 55599179-55604178 Phaseolus vulgaris
Phvul.008G208300 10.0kb upstream 10.0kb upstream 15563 true Chr08: 55583616-55599178 Phaseolus vulgaris
Phvul.008G208300 10.0kb upstream 10.0kb upstream 10000 false Chr08: 55583616-55593615 Phaseolus vulgaris
Phvul.008G208300 10.0kb downstream 10.0kb downstream 15563 true Chr08: 55593616-55609178 Phaseolus vulgaris
Phvul.008G208300 10.0kb downstream 10.0kb downstream 10000 false Chr08: 55599179-55609178 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121618234 5273 Angiosperm View MSA
122255320 5265 Fabidae View MSA
123997094 5270 Rosid View MSA
123571445 5271 Pentapetalae View MSA
122606170 5272 Eudicot View MSA
120890341 5274 Embryophyte View MSA
122931000 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.90197 0.0 5.64564   Low
cufflinks 3.44421 0.0 9.63672    
cufflinks 2.47807 0.0 7.13614    
cufflinks 1.70938 0.0 5.19183   Low
cufflinks 2.30544 0.0 6.76597    
cufflinks 3.35686 0.0 9.40842    
cufflinks 3.13292 0.0 8.85193    
cufflinks 3.35096 0.0 9.36012    
cufflinks 2.67961 0.0 7.703    
cufflinks 5.02187 0.0 13.5949   High
cufflinks 2.52454 0.0 7.32803    

0 Strain