Gene : Phvul.008G193314 P. vulgaris v2.1
Defline:  (1 of 1) PTHR13228 - CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 5 Genomic Order:  1970
Name:  ? Phvul.008G193314 Secondary Identifier:  ? PAC:37160519
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G193314 0.5kb upstream 0.5kb upstream 6762 true Chr08: 53628615-53635376 Phaseolus vulgaris
Phvul.008G193314 0.5kb upstream 0.5kb upstream 500 false Chr08: 53628615-53629114 Phaseolus vulgaris
Phvul.008G193314 0.5kb downstream 0.5kb downstream 6762 true Chr08: 53629115-53635876 Phaseolus vulgaris
Phvul.008G193314 0.5kb downstream 0.5kb downstream 500 false Chr08: 53635377-53635876 Phaseolus vulgaris
Phvul.008G193314 1.0kb upstream 1.0kb upstream 7262 true Chr08: 53628115-53635376 Phaseolus vulgaris
Phvul.008G193314 1.0kb upstream 1.0kb upstream 1000 false Chr08: 53628115-53629114 Phaseolus vulgaris
Phvul.008G193314 1.0kb downstream 1.0kb downstream 7262 true Chr08: 53629115-53636376 Phaseolus vulgaris
Phvul.008G193314 1.0kb downstream 1.0kb downstream 1000 false Chr08: 53635377-53636376 Phaseolus vulgaris
Phvul.008G193314 2.0kb upstream 2.0kb upstream 8262 true Chr08: 53627115-53635376 Phaseolus vulgaris
Phvul.008G193314 2.0kb upstream 2.0kb upstream 2000 false Chr08: 53627115-53629114 Phaseolus vulgaris
Phvul.008G193314 2.0kb downstream 2.0kb downstream 8262 true Chr08: 53629115-53637376 Phaseolus vulgaris
Phvul.008G193314 2.0kb downstream 2.0kb downstream 2000 false Chr08: 53635377-53637376 Phaseolus vulgaris
Phvul.008G193314 5.0kb upstream 5.0kb upstream 11262 true Chr08: 53624115-53635376 Phaseolus vulgaris
Phvul.008G193314 5.0kb upstream 5.0kb upstream 5000 false Chr08: 53624115-53629114 Phaseolus vulgaris
Phvul.008G193314 5.0kb downstream 5.0kb downstream 11262 true Chr08: 53629115-53640376 Phaseolus vulgaris
Phvul.008G193314 5.0kb downstream 5.0kb downstream 5000 false Chr08: 53635377-53640376 Phaseolus vulgaris
Phvul.008G193314 10.0kb upstream 10.0kb upstream 16262 true Chr08: 53619115-53635376 Phaseolus vulgaris
Phvul.008G193314 10.0kb upstream 10.0kb upstream 10000 false Chr08: 53619115-53629114 Phaseolus vulgaris
Phvul.008G193314 10.0kb downstream 10.0kb downstream 16262 true Chr08: 53629115-53645376 Phaseolus vulgaris
Phvul.008G193314 10.0kb downstream 10.0kb downstream 10000 false Chr08: 53635377-53645376 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306803 5265 Fabidae View MSA
124066917 5270 Rosid View MSA
123747770 5271 Pentapetalae View MSA
122786026 5272 Eudicot View MSA
122043120 5273 Angiosperm View MSA
121345671 5274 Embryophyte View MSA
123424850 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.2443 0.0 28.8868   Low
cufflinks 20.2635 0.0 56.4529    
cufflinks 36.5563 0.0 108.316   High
cufflinks 21.0746 0.0 58.933    
cufflinks 25.5139 0.0 72.6407    
cufflinks 21.6957 0.0 60.5393    
cufflinks 17.2571 0.0 48.2142    
cufflinks 14.224 0.0 39.7444   Low
cufflinks 22.8904 0.0 63.998    
cufflinks 31.2966 0.0 91.222   High
cufflinks 27.4717 0.0 78.8727    

0 Strain