Gene : Phvul.008G192500 P. vulgaris v2.1
Defline:  (1 of 1) PTHR31529:SF6 - LOB DOMAIN-CONTAINING PROTEIN 33 Genomic Order:  1935
Name:  ? Phvul.008G192500 Secondary Identifier:  ? PAC:37159308
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G192500 0.5kb upstream 0.5kb upstream 1629 true Chr08: 53270843-53272471 Phaseolus vulgaris
Phvul.008G192500 0.5kb upstream 0.5kb upstream 500 false Chr08: 53270843-53271342 Phaseolus vulgaris
Phvul.008G192500 0.5kb downstream 0.5kb downstream 1629 true Chr08: 53271343-53272971 Phaseolus vulgaris
Phvul.008G192500 0.5kb downstream 0.5kb downstream 500 false Chr08: 53272472-53272971 Phaseolus vulgaris
Phvul.008G192500 1.0kb upstream 1.0kb upstream 2129 true Chr08: 53270343-53272471 Phaseolus vulgaris
Phvul.008G192500 1.0kb upstream 1.0kb upstream 1000 false Chr08: 53270343-53271342 Phaseolus vulgaris
Phvul.008G192500 1.0kb downstream 1.0kb downstream 2129 true Chr08: 53271343-53273471 Phaseolus vulgaris
Phvul.008G192500 1.0kb downstream 1.0kb downstream 1000 false Chr08: 53272472-53273471 Phaseolus vulgaris
Phvul.008G192500 2.0kb upstream 2.0kb upstream 3129 true Chr08: 53269343-53272471 Phaseolus vulgaris
Phvul.008G192500 2.0kb upstream 2.0kb upstream 2000 false Chr08: 53269343-53271342 Phaseolus vulgaris
Phvul.008G192500 2.0kb downstream 2.0kb downstream 3129 true Chr08: 53271343-53274471 Phaseolus vulgaris
Phvul.008G192500 2.0kb downstream 2.0kb downstream 2000 false Chr08: 53272472-53274471 Phaseolus vulgaris
Phvul.008G192500 5.0kb upstream 5.0kb upstream 6129 true Chr08: 53266343-53272471 Phaseolus vulgaris
Phvul.008G192500 5.0kb upstream 5.0kb upstream 5000 false Chr08: 53266343-53271342 Phaseolus vulgaris
Phvul.008G192500 5.0kb downstream 5.0kb downstream 6129 true Chr08: 53271343-53277471 Phaseolus vulgaris
Phvul.008G192500 5.0kb downstream 5.0kb downstream 5000 false Chr08: 53272472-53277471 Phaseolus vulgaris
Phvul.008G192500 10.0kb upstream 10.0kb upstream 11129 true Chr08: 53261343-53272471 Phaseolus vulgaris
Phvul.008G192500 10.0kb upstream 10.0kb upstream 10000 false Chr08: 53261343-53271342 Phaseolus vulgaris
Phvul.008G192500 10.0kb downstream 10.0kb downstream 11129 true Chr08: 53271343-53282471 Phaseolus vulgaris
Phvul.008G192500 10.0kb downstream 10.0kb downstream 10000 false Chr08: 53272472-53282471 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300328 5265 Fabidae View MSA
124067335 5270 Rosid View MSA
123752210 5271 Pentapetalae View MSA
122796223 5272 Eudicot View MSA
122048133 5273 Angiosperm View MSA
121350574 5274 Embryophyte View MSA
123381803 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0621459 0.0 0.31466 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain