Gene : Phvul.008G202500 P. vulgaris v2.1
Defline:  (1 of 2) PTHR10015//PTHR10015:SF177 - HEAT SHOCK TRANSCRIPTION FACTOR // SUBFAMILY NOT NAMED Genomic Order:  2064
Name:  ? Phvul.008G202500 Secondary Identifier:  ? PAC:37158262
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G202500 0.5kb upstream 0.5kb upstream 1924 true Chr08: 54896620-54898543 Phaseolus vulgaris
Phvul.008G202500 0.5kb upstream 0.5kb upstream 500 false Chr08: 54896620-54897119 Phaseolus vulgaris
Phvul.008G202500 0.5kb downstream 0.5kb downstream 1924 true Chr08: 54897120-54899043 Phaseolus vulgaris
Phvul.008G202500 0.5kb downstream 0.5kb downstream 500 false Chr08: 54898544-54899043 Phaseolus vulgaris
Phvul.008G202500 1.0kb upstream 1.0kb upstream 2424 true Chr08: 54896120-54898543 Phaseolus vulgaris
Phvul.008G202500 1.0kb upstream 1.0kb upstream 1000 false Chr08: 54896120-54897119 Phaseolus vulgaris
Phvul.008G202500 1.0kb downstream 1.0kb downstream 2424 true Chr08: 54897120-54899543 Phaseolus vulgaris
Phvul.008G202500 1.0kb downstream 1.0kb downstream 1000 false Chr08: 54898544-54899543 Phaseolus vulgaris
Phvul.008G202500 2.0kb upstream 2.0kb upstream 3424 true Chr08: 54895120-54898543 Phaseolus vulgaris
Phvul.008G202500 2.0kb upstream 2.0kb upstream 2000 false Chr08: 54895120-54897119 Phaseolus vulgaris
Phvul.008G202500 2.0kb downstream 2.0kb downstream 3424 true Chr08: 54897120-54900543 Phaseolus vulgaris
Phvul.008G202500 2.0kb downstream 2.0kb downstream 2000 false Chr08: 54898544-54900543 Phaseolus vulgaris
Phvul.008G202500 5.0kb upstream 5.0kb upstream 6424 true Chr08: 54892120-54898543 Phaseolus vulgaris
Phvul.008G202500 5.0kb upstream 5.0kb upstream 5000 false Chr08: 54892120-54897119 Phaseolus vulgaris
Phvul.008G202500 5.0kb downstream 5.0kb downstream 6424 true Chr08: 54897120-54903543 Phaseolus vulgaris
Phvul.008G202500 5.0kb downstream 5.0kb downstream 5000 false Chr08: 54898544-54903543 Phaseolus vulgaris
Phvul.008G202500 10.0kb upstream 10.0kb upstream 11424 true Chr08: 54887120-54898543 Phaseolus vulgaris
Phvul.008G202500 10.0kb upstream 10.0kb upstream 10000 false Chr08: 54887120-54897119 Phaseolus vulgaris
Phvul.008G202500 10.0kb downstream 10.0kb downstream 11424 true Chr08: 54897120-54908543 Phaseolus vulgaris
Phvul.008G202500 10.0kb downstream 10.0kb downstream 10000 false Chr08: 54898544-54908543 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297656 5265 Fabidae View MSA
124070016 5270 Rosid View MSA
123749561 5271 Pentapetalae View MSA
122794562 5272 Eudicot View MSA
122050286 5273 Angiosperm View MSA
121349623 5274 Embryophyte View MSA
123428852 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0704782 0.0 0.326723 Low Low
cufflinks 3.92613 0.0 12.4481    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 3.45262 0.0 11.2746    
cufflinks 5.62158 0.0 17.1709    
cufflinks 0.663428 0.0 2.52481    
cufflinks 0.299993 0.0 1.21235 Low  
cufflinks 3.34048 0.0 10.8401    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.03758 0.0 7.04923    

0 Strain