Gene : Phvul.008G202300 P. vulgaris v2.1
Defline:  (1 of 1) K16912 - ribosomal biogenesis protein LAS1 (LAS1) Genomic Order:  2062
Name:  ? Phvul.008G202300 Secondary Identifier:  ? PAC:37157997
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G202300 0.5kb upstream 0.5kb upstream 5813 true Chr08: 54883909-54889721 Phaseolus vulgaris
Phvul.008G202300 0.5kb upstream 0.5kb upstream 500 false Chr08: 54883909-54884408 Phaseolus vulgaris
Phvul.008G202300 0.5kb downstream 0.5kb downstream 5813 true Chr08: 54884409-54890221 Phaseolus vulgaris
Phvul.008G202300 0.5kb downstream 0.5kb downstream 500 false Chr08: 54889722-54890221 Phaseolus vulgaris
Phvul.008G202300 1.0kb upstream 1.0kb upstream 6313 true Chr08: 54883409-54889721 Phaseolus vulgaris
Phvul.008G202300 1.0kb upstream 1.0kb upstream 1000 false Chr08: 54883409-54884408 Phaseolus vulgaris
Phvul.008G202300 1.0kb downstream 1.0kb downstream 6313 true Chr08: 54884409-54890721 Phaseolus vulgaris
Phvul.008G202300 1.0kb downstream 1.0kb downstream 1000 false Chr08: 54889722-54890721 Phaseolus vulgaris
Phvul.008G202300 2.0kb upstream 2.0kb upstream 7313 true Chr08: 54882409-54889721 Phaseolus vulgaris
Phvul.008G202300 2.0kb upstream 2.0kb upstream 2000 false Chr08: 54882409-54884408 Phaseolus vulgaris
Phvul.008G202300 2.0kb downstream 2.0kb downstream 7313 true Chr08: 54884409-54891721 Phaseolus vulgaris
Phvul.008G202300 2.0kb downstream 2.0kb downstream 2000 false Chr08: 54889722-54891721 Phaseolus vulgaris
Phvul.008G202300 5.0kb upstream 5.0kb upstream 10313 true Chr08: 54879409-54889721 Phaseolus vulgaris
Phvul.008G202300 5.0kb upstream 5.0kb upstream 5000 false Chr08: 54879409-54884408 Phaseolus vulgaris
Phvul.008G202300 5.0kb downstream 5.0kb downstream 10313 true Chr08: 54884409-54894721 Phaseolus vulgaris
Phvul.008G202300 5.0kb downstream 5.0kb downstream 5000 false Chr08: 54889722-54894721 Phaseolus vulgaris
Phvul.008G202300 10.0kb upstream 10.0kb upstream 15313 true Chr08: 54874409-54889721 Phaseolus vulgaris
Phvul.008G202300 10.0kb upstream 10.0kb upstream 10000 false Chr08: 54874409-54884408 Phaseolus vulgaris
Phvul.008G202300 10.0kb downstream 10.0kb downstream 15313 true Chr08: 54884409-54899721 Phaseolus vulgaris
Phvul.008G202300 10.0kb downstream 10.0kb downstream 10000 false Chr08: 54889722-54899721 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308260 5265 Fabidae View MSA
124060949 5270 Rosid View MSA
123737052 5271 Pentapetalae View MSA
122791609 5272 Eudicot View MSA
122045405 5273 Angiosperm View MSA
121348561 5274 Embryophyte View MSA
123425932 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.73607 0.0 6.22833    
cufflinks 2.46279 0.0 9.08013    
cufflinks 2.95684 0.0 10.466   High
cufflinks 1.22784 0.0 4.71487   Low
cufflinks 2.0641 0.0 7.5176    
cufflinks 2.72177 0.0 9.01446    
cufflinks 2.28301 0.0 8.0475    
cufflinks 2.05286 0.0 6.99402    
cufflinks 2.78606 0.0 9.81143    
cufflinks 2.6898 0.0 9.25067    
cufflinks 2.19018 0.0 7.67233    

0 Strain