Gene : Phvul.008G202700 P. vulgaris v2.1
Defline:  (1 of 14) PF07816 - Protein of unknown function (DUF1645) (DUF1645) Genomic Order:  2066
Name:  ? Phvul.008G202700 Secondary Identifier:  ? PAC:37159156
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G202700 0.5kb upstream 0.5kb upstream 1508 true Chr08: 54910799-54912306 Phaseolus vulgaris
Phvul.008G202700 0.5kb upstream 0.5kb upstream 500 false Chr08: 54911807-54912306 Phaseolus vulgaris
Phvul.008G202700 0.5kb downstream 0.5kb downstream 1508 true Chr08: 54910299-54911806 Phaseolus vulgaris
Phvul.008G202700 0.5kb downstream 0.5kb downstream 500 false Chr08: 54910299-54910798 Phaseolus vulgaris
Phvul.008G202700 1.0kb upstream 1.0kb upstream 2008 true Chr08: 54910799-54912806 Phaseolus vulgaris
Phvul.008G202700 1.0kb upstream 1.0kb upstream 1000 false Chr08: 54911807-54912806 Phaseolus vulgaris
Phvul.008G202700 1.0kb downstream 1.0kb downstream 2008 true Chr08: 54909799-54911806 Phaseolus vulgaris
Phvul.008G202700 1.0kb downstream 1.0kb downstream 1000 false Chr08: 54909799-54910798 Phaseolus vulgaris
Phvul.008G202700 2.0kb upstream 2.0kb upstream 3008 true Chr08: 54910799-54913806 Phaseolus vulgaris
Phvul.008G202700 2.0kb upstream 2.0kb upstream 2000 false Chr08: 54911807-54913806 Phaseolus vulgaris
Phvul.008G202700 2.0kb downstream 2.0kb downstream 3008 true Chr08: 54908799-54911806 Phaseolus vulgaris
Phvul.008G202700 2.0kb downstream 2.0kb downstream 2000 false Chr08: 54908799-54910798 Phaseolus vulgaris
Phvul.008G202700 5.0kb upstream 5.0kb upstream 6008 true Chr08: 54910799-54916806 Phaseolus vulgaris
Phvul.008G202700 5.0kb upstream 5.0kb upstream 5000 false Chr08: 54911807-54916806 Phaseolus vulgaris
Phvul.008G202700 5.0kb downstream 5.0kb downstream 6008 true Chr08: 54905799-54911806 Phaseolus vulgaris
Phvul.008G202700 5.0kb downstream 5.0kb downstream 5000 false Chr08: 54905799-54910798 Phaseolus vulgaris
Phvul.008G202700 10.0kb upstream 10.0kb upstream 11008 true Chr08: 54910799-54921806 Phaseolus vulgaris
Phvul.008G202700 10.0kb upstream 10.0kb upstream 10000 false Chr08: 54911807-54921806 Phaseolus vulgaris
Phvul.008G202700 10.0kb downstream 10.0kb downstream 11008 true Chr08: 54900799-54911806 Phaseolus vulgaris
Phvul.008G202700 10.0kb downstream 10.0kb downstream 10000 false Chr08: 54900799-54910798 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303182 5265 Fabidae View MSA
124050555 5270 Rosid View MSA
123742674 5271 Pentapetalae View MSA
122795296 5272 Eudicot View MSA
122050621 5273 Angiosperm View MSA
121312030 5274 Embryophyte View MSA
123349243 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.105044 0.0 0.464329 Low  
cufflinks 0.100207 0.0 0.445973 Low  
cufflinks 0.0590769 0.0 0.275931 Low Low
cufflinks 0.0615217 0.0 0.289064 Low  
cufflinks 0.123155 0.0 0.539401 Low  
cufflinks 0.181857 0.0 0.764392 Low  
cufflinks 0.745686 0.0 2.79873   High
cufflinks 0.488983 0.0 1.896   High
cufflinks 0.597331 0.0 2.2846   High
cufflinks 0.0760776 0.0 0.348881 Low  
cufflinks 0.072695 0.0 0.33492 Low  

0 Strain