Gene : Phvul.008G292900 P. vulgaris v2.1
Defline:  (1 of 1) PTHR11689:SF14 - CHLORIDE CHANNEL PROTEIN 2 Genomic Order:  2947
Name:  ? Phvul.008G292900 Secondary Identifier:  ? PAC:37160062
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G292900 0.5kb upstream 0.5kb upstream 6698 true Chr08: 63003295-63009992 Phaseolus vulgaris
Phvul.008G292900 0.5kb upstream 0.5kb upstream 500 false Chr08: 63003295-63003794 Phaseolus vulgaris
Phvul.008G292900 0.5kb downstream 0.5kb downstream 6698 true Chr08: 63003795-63010492 Phaseolus vulgaris
Phvul.008G292900 0.5kb downstream 0.5kb downstream 500 false Chr08: 63009993-63010492 Phaseolus vulgaris
Phvul.008G292900 1.0kb upstream 1.0kb upstream 7198 true Chr08: 63002795-63009992 Phaseolus vulgaris
Phvul.008G292900 1.0kb upstream 1.0kb upstream 1000 false Chr08: 63002795-63003794 Phaseolus vulgaris
Phvul.008G292900 1.0kb downstream 1.0kb downstream 7198 true Chr08: 63003795-63010992 Phaseolus vulgaris
Phvul.008G292900 1.0kb downstream 1.0kb downstream 1000 false Chr08: 63009993-63010992 Phaseolus vulgaris
Phvul.008G292900 2.0kb upstream 2.0kb upstream 8198 true Chr08: 63001795-63009992 Phaseolus vulgaris
Phvul.008G292900 2.0kb upstream 2.0kb upstream 2000 false Chr08: 63001795-63003794 Phaseolus vulgaris
Phvul.008G292900 2.0kb downstream 2.0kb downstream 8198 true Chr08: 63003795-63011992 Phaseolus vulgaris
Phvul.008G292900 2.0kb downstream 2.0kb downstream 2000 false Chr08: 63009993-63011992 Phaseolus vulgaris
Phvul.008G292900 5.0kb upstream 5.0kb upstream 11198 true Chr08: 62998795-63009992 Phaseolus vulgaris
Phvul.008G292900 5.0kb upstream 5.0kb upstream 5000 false Chr08: 62998795-63003794 Phaseolus vulgaris
Phvul.008G292900 5.0kb downstream 5.0kb downstream 11198 true Chr08: 63003795-63014992 Phaseolus vulgaris
Phvul.008G292900 5.0kb downstream 5.0kb downstream 5000 false Chr08: 63009993-63014992 Phaseolus vulgaris
Phvul.008G292900 10.0kb upstream 10.0kb upstream 16198 true Chr08: 62993795-63009992 Phaseolus vulgaris
Phvul.008G292900 10.0kb upstream 10.0kb upstream 10000 false Chr08: 62993795-63003794 Phaseolus vulgaris
Phvul.008G292900 10.0kb downstream 10.0kb downstream 16198 true Chr08: 63003795-63019992 Phaseolus vulgaris
Phvul.008G292900 10.0kb downstream 10.0kb downstream 10000 false Chr08: 63009993-63019992 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302402 5265 Fabidae View MSA
124064511 5270 Rosid View MSA
123748133 5271 Pentapetalae View MSA
122793511 5272 Eudicot View MSA
122047702 5273 Angiosperm View MSA
121347705 5274 Embryophyte View MSA
123427001 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.17197 0.0 9.21509    
cufflinks 2.8814 0.0 8.46807    
cufflinks 18.9497 0.0 48.9831   High
cufflinks 1.9818 0.0 6.11479    
cufflinks 4.43819 0.0 12.4851    
cufflinks 6.76133 0.0 18.3128    
cufflinks 2.73595 0.0 8.08086    
cufflinks 3.67076 0.0 10.4624    
cufflinks 1.81042 0.0 5.63709   Low
cufflinks 4.23968 0.0 11.958    
cufflinks 2.79879 0.0 8.26869    

0 Strain