Gene : Phvul.L001675 P. vulgaris v2.1
Defline:  (1 of 16) PF04852 - Protein of unknown function (DUF640) (DUF640) Genomic Order:  1
Name:  ? Phvul.L001675 Secondary Identifier:  ? PAC:37157502
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Ontology Annotation Displayer

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Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.L001675 0.5kb upstream 0.5kb upstream 2367 true scaffold_458: 17281-19647 Phaseolus vulgaris
Phvul.L001675 0.5kb upstream 0.5kb upstream 500 false scaffold_458: 19148-19647 Phaseolus vulgaris
Phvul.L001675 0.5kb downstream 0.5kb downstream 2367 true scaffold_458: 16781-19147 Phaseolus vulgaris
Phvul.L001675 0.5kb downstream 0.5kb downstream 500 false scaffold_458: 16781-17280 Phaseolus vulgaris
Phvul.L001675 1.0kb upstream 1.0kb upstream 2867 true scaffold_458: 17281-20147 Phaseolus vulgaris
Phvul.L001675 1.0kb upstream 1.0kb upstream 1000 false scaffold_458: 19148-20147 Phaseolus vulgaris
Phvul.L001675 1.0kb downstream 1.0kb downstream 2867 true scaffold_458: 16281-19147 Phaseolus vulgaris
Phvul.L001675 1.0kb downstream 1.0kb downstream 1000 false scaffold_458: 16281-17280 Phaseolus vulgaris
Phvul.L001675 2.0kb upstream 2.0kb upstream 3867 true scaffold_458: 17281-21147 Phaseolus vulgaris
Phvul.L001675 2.0kb upstream 2.0kb upstream 2000 false scaffold_458: 19148-21147 Phaseolus vulgaris
Phvul.L001675 2.0kb downstream 2.0kb downstream 3867 true scaffold_458: 15281-19147 Phaseolus vulgaris
Phvul.L001675 2.0kb downstream 2.0kb downstream 2000 false scaffold_458: 15281-17280 Phaseolus vulgaris
Phvul.L001675 5.0kb upstream 5.0kb upstream 4321 true scaffold_458: 17281-21601 Phaseolus vulgaris
Phvul.L001675 5.0kb upstream 5.0kb upstream 2454 false scaffold_458: 19148-21601 Phaseolus vulgaris
Phvul.L001675 5.0kb downstream 5.0kb downstream 6867 true scaffold_458: 12281-19147 Phaseolus vulgaris
Phvul.L001675 5.0kb downstream 5.0kb downstream 5000 false scaffold_458: 12281-17280 Phaseolus vulgaris
Phvul.L001675 10.0kb upstream 10.0kb upstream 4321 true scaffold_458: 17281-21601 Phaseolus vulgaris
Phvul.L001675 10.0kb upstream 10.0kb upstream 2454 false scaffold_458: 19148-21601 Phaseolus vulgaris
Phvul.L001675 10.0kb downstream 10.0kb downstream 11867 true scaffold_458: 7281-19147 Phaseolus vulgaris
Phvul.L001675 10.0kb downstream 10.0kb downstream 10000 false scaffold_458: 7281-17280 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307412 5265 Fabidae View MSA
124063298 5270 Rosid View MSA
123753170 5271 Pentapetalae View MSA
122789282 5272 Eudicot View MSA
122049887 5273 Angiosperm View MSA
121351474 5274 Embryophyte View MSA
123382179 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.154258 0.0 0.638316 Low  
cufflinks 0.150408 0.0 0.624722 Low  
cufflinks 0.433873 0.0 2.00796 Low  
cufflinks 0.125623 0.0 1.12809 Low  
cufflinks 9.02003 0.0 28.5968   High
cufflinks 0.76151 0.0 3.4109    
cufflinks 0.060412 0.0 0.280687 Low  
cufflinks 0.0121465 0.0 0.0844896 Low Low
cufflinks 0.0641789 0.0 0.291554 Low  
cufflinks 0.00786522 0.0 0.0825325 Low Low
cufflinks 20.0696 0.0 64.9589   High

0 Strain