Gene : Phvul.L001854 P. vulgaris v2.1
Defline:  (1 of 2) K14834 - nucleolar complex protein 3 (NOC3) Genomic Order:  3
Name:  ? Phvul.L001854 Secondary Identifier:  ? PAC:37148451
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.L001854 0.5kb upstream 0.5kb upstream 10933 true scaffold_240: 8005-18937 Phaseolus vulgaris
Phvul.L001854 0.5kb upstream 0.5kb upstream 500 false scaffold_240: 8005-8504 Phaseolus vulgaris
Phvul.L001854 0.5kb downstream 0.5kb downstream 10933 true scaffold_240: 8505-19437 Phaseolus vulgaris
Phvul.L001854 0.5kb downstream 0.5kb downstream 500 false scaffold_240: 18938-19437 Phaseolus vulgaris
Phvul.L001854 1.0kb upstream 1.0kb upstream 11433 true scaffold_240: 7505-18937 Phaseolus vulgaris
Phvul.L001854 1.0kb upstream 1.0kb upstream 1000 false scaffold_240: 7505-8504 Phaseolus vulgaris
Phvul.L001854 1.0kb downstream 1.0kb downstream 11433 true scaffold_240: 8505-19937 Phaseolus vulgaris
Phvul.L001854 1.0kb downstream 1.0kb downstream 1000 false scaffold_240: 18938-19937 Phaseolus vulgaris
Phvul.L001854 2.0kb upstream 2.0kb upstream 12433 true scaffold_240: 6505-18937 Phaseolus vulgaris
Phvul.L001854 2.0kb upstream 2.0kb upstream 2000 false scaffold_240: 6505-8504 Phaseolus vulgaris
Phvul.L001854 2.0kb downstream 2.0kb downstream 12433 true scaffold_240: 8505-20937 Phaseolus vulgaris
Phvul.L001854 2.0kb downstream 2.0kb downstream 2000 false scaffold_240: 18938-20937 Phaseolus vulgaris
Phvul.L001854 5.0kb upstream 5.0kb upstream 15433 true scaffold_240: 3505-18937 Phaseolus vulgaris
Phvul.L001854 5.0kb upstream 5.0kb upstream 5000 false scaffold_240: 3505-8504 Phaseolus vulgaris
Phvul.L001854 5.0kb downstream 5.0kb downstream 15433 true scaffold_240: 8505-23937 Phaseolus vulgaris
Phvul.L001854 5.0kb downstream 5.0kb downstream 5000 false scaffold_240: 18938-23937 Phaseolus vulgaris
Phvul.L001854 10.0kb upstream 10.0kb upstream 18937 true scaffold_240: 1-18937 Phaseolus vulgaris
Phvul.L001854 10.0kb upstream 10.0kb upstream 8504 false scaffold_240: 1-8504 Phaseolus vulgaris
Phvul.L001854 10.0kb downstream 10.0kb downstream 20433 true scaffold_240: 8505-28937 Phaseolus vulgaris
Phvul.L001854 10.0kb downstream 10.0kb downstream 10000 false scaffold_240: 18938-28937 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300383 5265 Fabidae View MSA
124068176 5270 Rosid View MSA
123740562 5271 Pentapetalae View MSA
122786357 5272 Eudicot View MSA
122041726 5273 Angiosperm View MSA
121346572 5274 Embryophyte View MSA
123424637 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.4131 0.0 9.57427   Low
cufflinks 9.89666 0.0 25.7435    
cufflinks 9.35394 0.0 24.3438    
cufflinks 3.09636 0.0 8.85748   Low
cufflinks 9.00408 0.0 23.6227    
cufflinks 9.36766 0.0 24.4074    
cufflinks 15.7216 0.0 40.6551    
cufflinks 18.9551 0.0 49.2795   High
cufflinks 14.9478 0.0 38.6385    
cufflinks 15.8477 0.0 40.9737    
cufflinks 6.18444 0.0 16.6119    

0 Strain