Gene : Phvul.L001954 P. vulgaris v2.1
Defline:  (1 of 25) PTHR32077:SF7 - FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 11 Genomic Order:  4
Name:  ? Phvul.L001954 Secondary Identifier:  ? PAC:37148450
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.L001954 0.5kb upstream 0.5kb upstream 1379 true scaffold_240: 19374-20752 Phaseolus vulgaris
Phvul.L001954 0.5kb upstream 0.5kb upstream 500 false scaffold_240: 19374-19873 Phaseolus vulgaris
Phvul.L001954 0.5kb downstream 0.5kb downstream 1379 true scaffold_240: 19874-21252 Phaseolus vulgaris
Phvul.L001954 0.5kb downstream 0.5kb downstream 500 false scaffold_240: 20753-21252 Phaseolus vulgaris
Phvul.L001954 1.0kb upstream 1.0kb upstream 1879 true scaffold_240: 18874-20752 Phaseolus vulgaris
Phvul.L001954 1.0kb upstream 1.0kb upstream 1000 false scaffold_240: 18874-19873 Phaseolus vulgaris
Phvul.L001954 1.0kb downstream 1.0kb downstream 1879 true scaffold_240: 19874-21752 Phaseolus vulgaris
Phvul.L001954 1.0kb downstream 1.0kb downstream 1000 false scaffold_240: 20753-21752 Phaseolus vulgaris
Phvul.L001954 2.0kb upstream 2.0kb upstream 2879 true scaffold_240: 17874-20752 Phaseolus vulgaris
Phvul.L001954 2.0kb upstream 2.0kb upstream 2000 false scaffold_240: 17874-19873 Phaseolus vulgaris
Phvul.L001954 2.0kb downstream 2.0kb downstream 2879 true scaffold_240: 19874-22752 Phaseolus vulgaris
Phvul.L001954 2.0kb downstream 2.0kb downstream 2000 false scaffold_240: 20753-22752 Phaseolus vulgaris
Phvul.L001954 5.0kb upstream 5.0kb upstream 5879 true scaffold_240: 14874-20752 Phaseolus vulgaris
Phvul.L001954 5.0kb upstream 5.0kb upstream 5000 false scaffold_240: 14874-19873 Phaseolus vulgaris
Phvul.L001954 5.0kb downstream 5.0kb downstream 5879 true scaffold_240: 19874-25752 Phaseolus vulgaris
Phvul.L001954 5.0kb downstream 5.0kb downstream 5000 false scaffold_240: 20753-25752 Phaseolus vulgaris
Phvul.L001954 10.0kb upstream 10.0kb upstream 10879 true scaffold_240: 9874-20752 Phaseolus vulgaris
Phvul.L001954 10.0kb upstream 10.0kb upstream 10000 false scaffold_240: 9874-19873 Phaseolus vulgaris
Phvul.L001954 10.0kb downstream 10.0kb downstream 9753 true scaffold_240: 19874-29626 Phaseolus vulgaris
Phvul.L001954 10.0kb downstream 10.0kb downstream 8874 false scaffold_240: 20753-29626 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122031651 5273 Angiosperm View MSA
122297659 5265 Fabidae View MSA
124075064 5270 Rosid View MSA
123628735 5271 Pentapetalae View MSA
122662989 5272 Eudicot View MSA
121300660 5274 Embryophyte View MSA
123338397 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.00614776 0.0 0.0425603 Low Low
cufflinks 0.0230305 0.0 0.123829 Low Low
cufflinks 0.224137 0.0 0.946059 Low  
cufflinks 0.0375982 0.0 0.18979 Low  
cufflinks 4.71491 0.0 15.1825    
cufflinks 0.276188 0.0 1.14449 Low  
cufflinks 7.784 0.0 23.4268   High
cufflinks 1.12743 0.0 4.18157    
cufflinks 2.26036 0.0 7.81861    
cufflinks 0.073079 0.0 0.346372 Low  
cufflinks 23.3448 0.0 63.4114   High

0 Strain