Gene : Phvul.008G282000 P. vulgaris v2.1
Defline:  (1 of 1) PTHR11627:SF19 - FRUCTOSE-BISPHOSPHATE ALDOLASE-RELATED Genomic Order:  2839
Name:  ? Phvul.008G282000 Secondary Identifier:  ? PAC:37160076
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Sequence Feature Displayer

Ontology Annotation Displayer

9 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris ANAEROFRUCAT-PWY Phaseolus vulgaris pathologic  
Pvulgaris ANAGLYCOLYSIS-PWY Phaseolus vulgaris pathologic  
Pvulgaris CALVIN-PWY Phaseolus vulgaris pathologic  
Pvulgaris GLUCONEO-PWY Phaseolus vulgaris pathologic  
Pvulgaris PHOTOALL-PWY Phaseolus vulgaris pathologic  
Pvulgaris PWY-1042 Phaseolus vulgaris pathologic  
Pvulgaris PWY-5464 Phaseolus vulgaris pathologic  
Pvulgaris PWY66-373 Phaseolus vulgaris pathologic  
Pvulgaris SUCSYN-PWY Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G282000 0.5kb upstream 0.5kb upstream 3049 true Chr08: 62277974-62281022 Phaseolus vulgaris
Phvul.008G282000 0.5kb upstream 0.5kb upstream 500 false Chr08: 62277974-62278473 Phaseolus vulgaris
Phvul.008G282000 0.5kb downstream 0.5kb downstream 3049 true Chr08: 62278474-62281522 Phaseolus vulgaris
Phvul.008G282000 0.5kb downstream 0.5kb downstream 500 false Chr08: 62281023-62281522 Phaseolus vulgaris
Phvul.008G282000 1.0kb upstream 1.0kb upstream 3549 true Chr08: 62277474-62281022 Phaseolus vulgaris
Phvul.008G282000 1.0kb upstream 1.0kb upstream 1000 false Chr08: 62277474-62278473 Phaseolus vulgaris
Phvul.008G282000 1.0kb downstream 1.0kb downstream 3549 true Chr08: 62278474-62282022 Phaseolus vulgaris
Phvul.008G282000 1.0kb downstream 1.0kb downstream 1000 false Chr08: 62281023-62282022 Phaseolus vulgaris
Phvul.008G282000 2.0kb upstream 2.0kb upstream 4549 true Chr08: 62276474-62281022 Phaseolus vulgaris
Phvul.008G282000 2.0kb upstream 2.0kb upstream 2000 false Chr08: 62276474-62278473 Phaseolus vulgaris
Phvul.008G282000 2.0kb downstream 2.0kb downstream 4549 true Chr08: 62278474-62283022 Phaseolus vulgaris
Phvul.008G282000 2.0kb downstream 2.0kb downstream 2000 false Chr08: 62281023-62283022 Phaseolus vulgaris
Phvul.008G282000 5.0kb upstream 5.0kb upstream 7549 true Chr08: 62273474-62281022 Phaseolus vulgaris
Phvul.008G282000 5.0kb upstream 5.0kb upstream 5000 false Chr08: 62273474-62278473 Phaseolus vulgaris
Phvul.008G282000 5.0kb downstream 5.0kb downstream 7549 true Chr08: 62278474-62286022 Phaseolus vulgaris
Phvul.008G282000 5.0kb downstream 5.0kb downstream 5000 false Chr08: 62281023-62286022 Phaseolus vulgaris
Phvul.008G282000 10.0kb upstream 10.0kb upstream 12549 true Chr08: 62268474-62281022 Phaseolus vulgaris
Phvul.008G282000 10.0kb upstream 10.0kb upstream 10000 false Chr08: 62268474-62278473 Phaseolus vulgaris
Phvul.008G282000 10.0kb downstream 10.0kb downstream 12549 true Chr08: 62278474-62291022 Phaseolus vulgaris
Phvul.008G282000 10.0kb downstream 10.0kb downstream 10000 false Chr08: 62281023-62291022 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302408 5265 Fabidae View MSA
124065904 5270 Rosid View MSA
123751552 5271 Pentapetalae View MSA
122795732 5272 Eudicot View MSA
122046933 5273 Angiosperm View MSA
121346548 5274 Embryophyte View MSA
123428415 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.32174 0.0 4.46151    
cufflinks 1.06528 0.0 3.67208    
cufflinks 376.798 0.0 1290.62 High High
cufflinks 2.67613 0.0 8.3357    
cufflinks 6.97408 0.0 19.5654    
cufflinks 65.6962 0.0 175.634 High High
cufflinks 0.0437036 0.0 0.198982 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0236513 0.0 0.114878 Low Low
cufflinks 17.9259 0.0 46.8005    
cufflinks 3.11167 0.0 9.51224    

0 Strain