Gene : Phvul.008G284900 P. vulgaris v2.1
Defline:  (1 of 1) K14300 - nuclear pore complex protein Nup133 (NUP133) Genomic Order:  2867
Name:  ? Phvul.008G284900 Secondary Identifier:  ? PAC:37159281
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G284900 0.5kb upstream 0.5kb upstream 7034 true Chr08: 62489289-62496322 Phaseolus vulgaris
Phvul.008G284900 0.5kb upstream 0.5kb upstream 500 false Chr08: 62489289-62489788 Phaseolus vulgaris
Phvul.008G284900 0.5kb downstream 0.5kb downstream 7034 true Chr08: 62489789-62496822 Phaseolus vulgaris
Phvul.008G284900 0.5kb downstream 0.5kb downstream 500 false Chr08: 62496323-62496822 Phaseolus vulgaris
Phvul.008G284900 1.0kb upstream 1.0kb upstream 7534 true Chr08: 62488789-62496322 Phaseolus vulgaris
Phvul.008G284900 1.0kb upstream 1.0kb upstream 1000 false Chr08: 62488789-62489788 Phaseolus vulgaris
Phvul.008G284900 1.0kb downstream 1.0kb downstream 7534 true Chr08: 62489789-62497322 Phaseolus vulgaris
Phvul.008G284900 1.0kb downstream 1.0kb downstream 1000 false Chr08: 62496323-62497322 Phaseolus vulgaris
Phvul.008G284900 2.0kb upstream 2.0kb upstream 8534 true Chr08: 62487789-62496322 Phaseolus vulgaris
Phvul.008G284900 2.0kb upstream 2.0kb upstream 2000 false Chr08: 62487789-62489788 Phaseolus vulgaris
Phvul.008G284900 2.0kb downstream 2.0kb downstream 8534 true Chr08: 62489789-62498322 Phaseolus vulgaris
Phvul.008G284900 2.0kb downstream 2.0kb downstream 2000 false Chr08: 62496323-62498322 Phaseolus vulgaris
Phvul.008G284900 5.0kb upstream 5.0kb upstream 11534 true Chr08: 62484789-62496322 Phaseolus vulgaris
Phvul.008G284900 5.0kb upstream 5.0kb upstream 5000 false Chr08: 62484789-62489788 Phaseolus vulgaris
Phvul.008G284900 5.0kb downstream 5.0kb downstream 11534 true Chr08: 62489789-62501322 Phaseolus vulgaris
Phvul.008G284900 5.0kb downstream 5.0kb downstream 5000 false Chr08: 62496323-62501322 Phaseolus vulgaris
Phvul.008G284900 10.0kb upstream 10.0kb upstream 16534 true Chr08: 62479789-62496322 Phaseolus vulgaris
Phvul.008G284900 10.0kb upstream 10.0kb upstream 10000 false Chr08: 62479789-62489788 Phaseolus vulgaris
Phvul.008G284900 10.0kb downstream 10.0kb downstream 16534 true Chr08: 62489789-62506322 Phaseolus vulgaris
Phvul.008G284900 10.0kb downstream 10.0kb downstream 10000 false Chr08: 62496323-62506322 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307981 5265 Fabidae View MSA
124065950 5270 Rosid View MSA
123739362 5271 Pentapetalae View MSA
122792648 5272 Eudicot View MSA
122045150 5273 Angiosperm View MSA
121345241 5274 Embryophyte View MSA
123424593 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.02819 0.0 5.75888   Low
cufflinks 7.82603 0.0 20.2685    
cufflinks 5.5475 0.0 14.5293    
cufflinks 2.19866 0.0 6.23584   Low
cufflinks 5.4117 0.0 14.2483    
cufflinks 6.6822 0.0 17.375    
cufflinks 7.6558 0.0 19.8374    
cufflinks 7.10126 0.0 18.4188    
cufflinks 7.16186 0.0 18.5963    
cufflinks 6.0469 0.0 15.7883    
cufflinks 4.1087 0.0 11.0151    

0 Strain