Gene : Phvul.008G285100 P. vulgaris v2.1
Defline:  (1 of 1) K08913 - light-harvesting complex II chlorophyll a/b binding protein 2 (LHCB2) Genomic Order:  2869
Name:  ? Phvul.008G285100 Secondary Identifier:  ? PAC:37159121
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G285100 0.5kb upstream 0.5kb upstream 2107 true Chr08: 62506748-62508854 Phaseolus vulgaris
Phvul.008G285100 0.5kb upstream 0.5kb upstream 500 false Chr08: 62506748-62507247 Phaseolus vulgaris
Phvul.008G285100 0.5kb downstream 0.5kb downstream 2107 true Chr08: 62507248-62509354 Phaseolus vulgaris
Phvul.008G285100 0.5kb downstream 0.5kb downstream 500 false Chr08: 62508855-62509354 Phaseolus vulgaris
Phvul.008G285100 1.0kb upstream 1.0kb upstream 2607 true Chr08: 62506248-62508854 Phaseolus vulgaris
Phvul.008G285100 1.0kb upstream 1.0kb upstream 1000 false Chr08: 62506248-62507247 Phaseolus vulgaris
Phvul.008G285100 1.0kb downstream 1.0kb downstream 2607 true Chr08: 62507248-62509854 Phaseolus vulgaris
Phvul.008G285100 1.0kb downstream 1.0kb downstream 1000 false Chr08: 62508855-62509854 Phaseolus vulgaris
Phvul.008G285100 2.0kb upstream 2.0kb upstream 3607 true Chr08: 62505248-62508854 Phaseolus vulgaris
Phvul.008G285100 2.0kb upstream 2.0kb upstream 2000 false Chr08: 62505248-62507247 Phaseolus vulgaris
Phvul.008G285100 2.0kb downstream 2.0kb downstream 3607 true Chr08: 62507248-62510854 Phaseolus vulgaris
Phvul.008G285100 2.0kb downstream 2.0kb downstream 2000 false Chr08: 62508855-62510854 Phaseolus vulgaris
Phvul.008G285100 5.0kb upstream 5.0kb upstream 6607 true Chr08: 62502248-62508854 Phaseolus vulgaris
Phvul.008G285100 5.0kb upstream 5.0kb upstream 5000 false Chr08: 62502248-62507247 Phaseolus vulgaris
Phvul.008G285100 5.0kb downstream 5.0kb downstream 6607 true Chr08: 62507248-62513854 Phaseolus vulgaris
Phvul.008G285100 5.0kb downstream 5.0kb downstream 5000 false Chr08: 62508855-62513854 Phaseolus vulgaris
Phvul.008G285100 10.0kb upstream 10.0kb upstream 11607 true Chr08: 62497248-62508854 Phaseolus vulgaris
Phvul.008G285100 10.0kb upstream 10.0kb upstream 10000 false Chr08: 62497248-62507247 Phaseolus vulgaris
Phvul.008G285100 10.0kb downstream 10.0kb downstream 11607 true Chr08: 62507248-62518854 Phaseolus vulgaris
Phvul.008G285100 10.0kb downstream 10.0kb downstream 10000 false Chr08: 62508855-62518854 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041019 5273 Angiosperm View MSA
122302628 5265 Fabidae View MSA
124062505 5270 Rosid View MSA
123749191 5271 Pentapetalae View MSA
122791500 5272 Eudicot View MSA
121349648 5274 Embryophyte View MSA
123426313 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 848.496 0.0 3367.8 High  
cufflinks 1025.0 0.0 4308.27 High  
cufflinks 7951.83 0.0 65579.8 High High
cufflinks 608.917 0.0 2228.53 High  
cufflinks 1965.68 0.0 9900.57 High  
cufflinks 1824.73 0.0 8987.22 High  
cufflinks 1.97399 0.0 6.48174   Low
cufflinks 1.06163 0.0 3.75133   Low
cufflinks 9.7704 0.0 26.996   Low
cufflinks 554.884 0.0 1977.5 High  
cufflinks 769.656 0.0 2996.79 High  

0 Strain