Gene : Phvul.008G287700 P. vulgaris v2.1
Defline:  (1 of 1) PTHR32077:SF3 - FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 7 Genomic Order:  2895
Name:  ? Phvul.008G287700 Secondary Identifier:  ? PAC:37159953
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G287700 0.5kb upstream 0.5kb upstream 2851 true Chr08: 62673337-62676187 Phaseolus vulgaris
Phvul.008G287700 0.5kb upstream 0.5kb upstream 500 false Chr08: 62673337-62673836 Phaseolus vulgaris
Phvul.008G287700 0.5kb downstream 0.5kb downstream 2851 true Chr08: 62673837-62676687 Phaseolus vulgaris
Phvul.008G287700 0.5kb downstream 0.5kb downstream 500 false Chr08: 62676188-62676687 Phaseolus vulgaris
Phvul.008G287700 1.0kb upstream 1.0kb upstream 3351 true Chr08: 62672837-62676187 Phaseolus vulgaris
Phvul.008G287700 1.0kb upstream 1.0kb upstream 1000 false Chr08: 62672837-62673836 Phaseolus vulgaris
Phvul.008G287700 1.0kb downstream 1.0kb downstream 3351 true Chr08: 62673837-62677187 Phaseolus vulgaris
Phvul.008G287700 1.0kb downstream 1.0kb downstream 1000 false Chr08: 62676188-62677187 Phaseolus vulgaris
Phvul.008G287700 2.0kb upstream 2.0kb upstream 4351 true Chr08: 62671837-62676187 Phaseolus vulgaris
Phvul.008G287700 2.0kb upstream 2.0kb upstream 2000 false Chr08: 62671837-62673836 Phaseolus vulgaris
Phvul.008G287700 2.0kb downstream 2.0kb downstream 4351 true Chr08: 62673837-62678187 Phaseolus vulgaris
Phvul.008G287700 2.0kb downstream 2.0kb downstream 2000 false Chr08: 62676188-62678187 Phaseolus vulgaris
Phvul.008G287700 5.0kb upstream 5.0kb upstream 7351 true Chr08: 62668837-62676187 Phaseolus vulgaris
Phvul.008G287700 5.0kb upstream 5.0kb upstream 5000 false Chr08: 62668837-62673836 Phaseolus vulgaris
Phvul.008G287700 5.0kb downstream 5.0kb downstream 7351 true Chr08: 62673837-62681187 Phaseolus vulgaris
Phvul.008G287700 5.0kb downstream 5.0kb downstream 5000 false Chr08: 62676188-62681187 Phaseolus vulgaris
Phvul.008G287700 10.0kb upstream 10.0kb upstream 12351 true Chr08: 62663837-62676187 Phaseolus vulgaris
Phvul.008G287700 10.0kb upstream 10.0kb upstream 10000 false Chr08: 62663837-62673836 Phaseolus vulgaris
Phvul.008G287700 10.0kb downstream 10.0kb downstream 12351 true Chr08: 62673837-62686187 Phaseolus vulgaris
Phvul.008G287700 10.0kb downstream 10.0kb downstream 10000 false Chr08: 62676188-62686187 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299041 5265 Fabidae View MSA
124061548 5270 Rosid View MSA
123744352 5271 Pentapetalae View MSA
122795862 5272 Eudicot View MSA
122048693 5273 Angiosperm View MSA
121351509 5274 Embryophyte View MSA
123426561 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 33.0065 0.0 105.187 High Low
cufflinks 106.063 0.0 375.487 High  
cufflinks 85.8946 0.0 294.762 High  
cufflinks 274.941 0.0 1082.88 High High
cufflinks 122.855 0.0 384.607 High  
cufflinks 153.051 0.0 591.793 High  
cufflinks 80.747 0.0 271.68 High  
cufflinks 73.8089 0.0 222.588 High  
cufflinks 126.162 0.0 399.145 High  
cufflinks 54.9559 0.0 176.624 High Low
cufflinks 180.444 0.0 717.213 High  

0 Strain