Gene : Phvul.008G286400 P. vulgaris v2.1
Defline:  (1 of 21) PF00651//PF03000 - BTB/POZ domain (BTB) // NPH3 family (NPH3) Genomic Order:  2882
Name:  ? Phvul.008G286400 Secondary Identifier:  ? PAC:37158787
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G286400 0.5kb upstream 0.5kb upstream 3822 true Chr08: 62588253-62592074 Phaseolus vulgaris
Phvul.008G286400 0.5kb upstream 0.5kb upstream 500 false Chr08: 62588253-62588752 Phaseolus vulgaris
Phvul.008G286400 0.5kb downstream 0.5kb downstream 3822 true Chr08: 62588753-62592574 Phaseolus vulgaris
Phvul.008G286400 0.5kb downstream 0.5kb downstream 500 false Chr08: 62592075-62592574 Phaseolus vulgaris
Phvul.008G286400 1.0kb upstream 1.0kb upstream 4322 true Chr08: 62587753-62592074 Phaseolus vulgaris
Phvul.008G286400 1.0kb upstream 1.0kb upstream 1000 false Chr08: 62587753-62588752 Phaseolus vulgaris
Phvul.008G286400 1.0kb downstream 1.0kb downstream 4322 true Chr08: 62588753-62593074 Phaseolus vulgaris
Phvul.008G286400 1.0kb downstream 1.0kb downstream 1000 false Chr08: 62592075-62593074 Phaseolus vulgaris
Phvul.008G286400 2.0kb upstream 2.0kb upstream 5322 true Chr08: 62586753-62592074 Phaseolus vulgaris
Phvul.008G286400 2.0kb upstream 2.0kb upstream 2000 false Chr08: 62586753-62588752 Phaseolus vulgaris
Phvul.008G286400 2.0kb downstream 2.0kb downstream 5322 true Chr08: 62588753-62594074 Phaseolus vulgaris
Phvul.008G286400 2.0kb downstream 2.0kb downstream 2000 false Chr08: 62592075-62594074 Phaseolus vulgaris
Phvul.008G286400 5.0kb upstream 5.0kb upstream 8322 true Chr08: 62583753-62592074 Phaseolus vulgaris
Phvul.008G286400 5.0kb upstream 5.0kb upstream 5000 false Chr08: 62583753-62588752 Phaseolus vulgaris
Phvul.008G286400 5.0kb downstream 5.0kb downstream 8322 true Chr08: 62588753-62597074 Phaseolus vulgaris
Phvul.008G286400 5.0kb downstream 5.0kb downstream 5000 false Chr08: 62592075-62597074 Phaseolus vulgaris
Phvul.008G286400 10.0kb upstream 10.0kb upstream 13322 true Chr08: 62578753-62592074 Phaseolus vulgaris
Phvul.008G286400 10.0kb upstream 10.0kb upstream 10000 false Chr08: 62578753-62588752 Phaseolus vulgaris
Phvul.008G286400 10.0kb downstream 10.0kb downstream 13322 true Chr08: 62588753-62602074 Phaseolus vulgaris
Phvul.008G286400 10.0kb downstream 10.0kb downstream 10000 false Chr08: 62592075-62602074 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307082 5265 Fabidae View MSA
124066925 5270 Rosid View MSA
123736783 5271 Pentapetalae View MSA
122790175 5272 Eudicot View MSA
122044122 5273 Angiosperm View MSA
121348430 5274 Embryophyte View MSA
123380863 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0555324 0.0 0.238789 Low  
cufflinks 0.178906 0.0 0.697684 Low  
cufflinks 0.0455005 0.0 0.198313 Low  
cufflinks 0.0539226 0.0 0.233833 Low  
cufflinks 0.12087 0.0 0.488573 Low  
cufflinks 0.0524751 0.0 0.226426 Low  
cufflinks 3.19149 0.0 9.27219   High
cufflinks 3.47391 0.0 9.97867   High
cufflinks 2.41573 0.0 7.255   High
cufflinks 0.0434979 0.0 0.191597 Low  
cufflinks 0.213778 0.0 0.825307 Low  

0 Strain