Gene : Phvul.008G289600 P. vulgaris v2.1
Defline:  (1 of 2) PTHR10766:SF44 - ENDOMEMBRANE FAMILY PROTEIN 70 Genomic Order:  2914
Name:  ? Phvul.008G289600 Secondary Identifier:  ? PAC:37158021
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G289600 0.5kb upstream 0.5kb upstream 3274 true Chr08: 62790201-62793474 Phaseolus vulgaris
Phvul.008G289600 0.5kb upstream 0.5kb upstream 500 false Chr08: 62792975-62793474 Phaseolus vulgaris
Phvul.008G289600 0.5kb downstream 0.5kb downstream 3274 true Chr08: 62789701-62792974 Phaseolus vulgaris
Phvul.008G289600 0.5kb downstream 0.5kb downstream 500 false Chr08: 62789701-62790200 Phaseolus vulgaris
Phvul.008G289600 1.0kb upstream 1.0kb upstream 3774 true Chr08: 62790201-62793974 Phaseolus vulgaris
Phvul.008G289600 1.0kb upstream 1.0kb upstream 1000 false Chr08: 62792975-62793974 Phaseolus vulgaris
Phvul.008G289600 1.0kb downstream 1.0kb downstream 3774 true Chr08: 62789201-62792974 Phaseolus vulgaris
Phvul.008G289600 1.0kb downstream 1.0kb downstream 1000 false Chr08: 62789201-62790200 Phaseolus vulgaris
Phvul.008G289600 2.0kb upstream 2.0kb upstream 4774 true Chr08: 62790201-62794974 Phaseolus vulgaris
Phvul.008G289600 2.0kb upstream 2.0kb upstream 2000 false Chr08: 62792975-62794974 Phaseolus vulgaris
Phvul.008G289600 2.0kb downstream 2.0kb downstream 4774 true Chr08: 62788201-62792974 Phaseolus vulgaris
Phvul.008G289600 2.0kb downstream 2.0kb downstream 2000 false Chr08: 62788201-62790200 Phaseolus vulgaris
Phvul.008G289600 5.0kb upstream 5.0kb upstream 7774 true Chr08: 62790201-62797974 Phaseolus vulgaris
Phvul.008G289600 5.0kb upstream 5.0kb upstream 5000 false Chr08: 62792975-62797974 Phaseolus vulgaris
Phvul.008G289600 5.0kb downstream 5.0kb downstream 7774 true Chr08: 62785201-62792974 Phaseolus vulgaris
Phvul.008G289600 5.0kb downstream 5.0kb downstream 5000 false Chr08: 62785201-62790200 Phaseolus vulgaris
Phvul.008G289600 10.0kb upstream 10.0kb upstream 12774 true Chr08: 62790201-62802974 Phaseolus vulgaris
Phvul.008G289600 10.0kb upstream 10.0kb upstream 10000 false Chr08: 62792975-62802974 Phaseolus vulgaris
Phvul.008G289600 10.0kb downstream 10.0kb downstream 12774 true Chr08: 62780201-62792974 Phaseolus vulgaris
Phvul.008G289600 10.0kb downstream 10.0kb downstream 10000 false Chr08: 62780201-62790200 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309439 5265 Fabidae View MSA
124062791 5270 Rosid View MSA
123741682 5271 Pentapetalae View MSA
122787007 5272 Eudicot View MSA
122044185 5273 Angiosperm View MSA
121349188 5274 Embryophyte View MSA
123426870 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.59016 0.0 22.8912   Low
cufflinks 37.8846 0.0 99.7396 High  
cufflinks 39.5046 0.0 104.601 High  
cufflinks 62.8283 0.0 171.04 High High
cufflinks 34.6404 0.0 90.6619 High  
cufflinks 45.403 0.0 121.1 High  
cufflinks 20.5316 0.0 53.0704    
cufflinks 18.6485 0.0 48.2088    
cufflinks 40.5454 0.0 106.807 High  
cufflinks 6.64424 0.0 18.1225   Low
cufflinks 43.3574 0.0 114.881 High  

0 Strain