Gene : Phvul.008G272400 P. vulgaris v2.1
Defline:  (1 of 1) PTHR30560:SF3 - TRIGGER FACTOR-LIKE PROTEIN TIG Genomic Order:  2737
Name:  ? Phvul.008G272400 Secondary Identifier:  ? PAC:37158894
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G272400 0.5kb upstream 0.5kb upstream 6225 true Chr08: 61638279-61644503 Phaseolus vulgaris
Phvul.008G272400 0.5kb upstream 0.5kb upstream 500 false Chr08: 61638279-61638778 Phaseolus vulgaris
Phvul.008G272400 0.5kb downstream 0.5kb downstream 6225 true Chr08: 61638779-61645003 Phaseolus vulgaris
Phvul.008G272400 0.5kb downstream 0.5kb downstream 500 false Chr08: 61644504-61645003 Phaseolus vulgaris
Phvul.008G272400 1.0kb upstream 1.0kb upstream 6725 true Chr08: 61637779-61644503 Phaseolus vulgaris
Phvul.008G272400 1.0kb upstream 1.0kb upstream 1000 false Chr08: 61637779-61638778 Phaseolus vulgaris
Phvul.008G272400 1.0kb downstream 1.0kb downstream 6725 true Chr08: 61638779-61645503 Phaseolus vulgaris
Phvul.008G272400 1.0kb downstream 1.0kb downstream 1000 false Chr08: 61644504-61645503 Phaseolus vulgaris
Phvul.008G272400 2.0kb upstream 2.0kb upstream 7725 true Chr08: 61636779-61644503 Phaseolus vulgaris
Phvul.008G272400 2.0kb upstream 2.0kb upstream 2000 false Chr08: 61636779-61638778 Phaseolus vulgaris
Phvul.008G272400 2.0kb downstream 2.0kb downstream 7725 true Chr08: 61638779-61646503 Phaseolus vulgaris
Phvul.008G272400 2.0kb downstream 2.0kb downstream 2000 false Chr08: 61644504-61646503 Phaseolus vulgaris
Phvul.008G272400 5.0kb upstream 5.0kb upstream 10725 true Chr08: 61633779-61644503 Phaseolus vulgaris
Phvul.008G272400 5.0kb upstream 5.0kb upstream 5000 false Chr08: 61633779-61638778 Phaseolus vulgaris
Phvul.008G272400 5.0kb downstream 5.0kb downstream 10725 true Chr08: 61638779-61649503 Phaseolus vulgaris
Phvul.008G272400 5.0kb downstream 5.0kb downstream 5000 false Chr08: 61644504-61649503 Phaseolus vulgaris
Phvul.008G272400 10.0kb upstream 10.0kb upstream 15725 true Chr08: 61628779-61644503 Phaseolus vulgaris
Phvul.008G272400 10.0kb upstream 10.0kb upstream 10000 false Chr08: 61628779-61638778 Phaseolus vulgaris
Phvul.008G272400 10.0kb downstream 10.0kb downstream 15725 true Chr08: 61638779-61654503 Phaseolus vulgaris
Phvul.008G272400 10.0kb downstream 10.0kb downstream 10000 false Chr08: 61644504-61654503 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304208 5265 Fabidae View MSA
124061655 5270 Rosid View MSA
123738103 5271 Pentapetalae View MSA
122786628 5272 Eudicot View MSA
122042238 5273 Angiosperm View MSA
121345514 5274 Embryophyte View MSA
123423774 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.5489 0.0 38.1192    
cufflinks 8.8773 0.0 24.0943    
cufflinks 80.4899 0.0 221.929 High High
cufflinks 6.89146 0.0 19.2693    
cufflinks 4.49942 0.0 13.1823    
cufflinks 45.1455 0.0 118.6 High High
cufflinks 1.32114 0.0 4.38933   Low
cufflinks 1.94264 0.0 6.14015    
cufflinks 0.532688 0.0 1.94716   Low
cufflinks 8.41325 0.0 22.9953    
cufflinks 2.86556 0.0 8.80109    

0 Strain