Gene : Phvul.008G274500 P. vulgaris v2.1
Defline:  (1 of 1) K17292 - tubulin-specific chaperone A (TBCA) Genomic Order:  2758
Name:  ? Phvul.008G274500 Secondary Identifier:  ? PAC:37157626
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G274500 0.5kb upstream 0.5kb upstream 2418 true Chr08: 61816751-61819168 Phaseolus vulgaris
Phvul.008G274500 0.5kb upstream 0.5kb upstream 500 false Chr08: 61818669-61819168 Phaseolus vulgaris
Phvul.008G274500 0.5kb downstream 0.5kb downstream 2418 true Chr08: 61816251-61818668 Phaseolus vulgaris
Phvul.008G274500 0.5kb downstream 0.5kb downstream 500 false Chr08: 61816251-61816750 Phaseolus vulgaris
Phvul.008G274500 1.0kb upstream 1.0kb upstream 2918 true Chr08: 61816751-61819668 Phaseolus vulgaris
Phvul.008G274500 1.0kb upstream 1.0kb upstream 1000 false Chr08: 61818669-61819668 Phaseolus vulgaris
Phvul.008G274500 1.0kb downstream 1.0kb downstream 2918 true Chr08: 61815751-61818668 Phaseolus vulgaris
Phvul.008G274500 1.0kb downstream 1.0kb downstream 1000 false Chr08: 61815751-61816750 Phaseolus vulgaris
Phvul.008G274500 2.0kb upstream 2.0kb upstream 3918 true Chr08: 61816751-61820668 Phaseolus vulgaris
Phvul.008G274500 2.0kb upstream 2.0kb upstream 2000 false Chr08: 61818669-61820668 Phaseolus vulgaris
Phvul.008G274500 2.0kb downstream 2.0kb downstream 3918 true Chr08: 61814751-61818668 Phaseolus vulgaris
Phvul.008G274500 2.0kb downstream 2.0kb downstream 2000 false Chr08: 61814751-61816750 Phaseolus vulgaris
Phvul.008G274500 5.0kb upstream 5.0kb upstream 6918 true Chr08: 61816751-61823668 Phaseolus vulgaris
Phvul.008G274500 5.0kb upstream 5.0kb upstream 5000 false Chr08: 61818669-61823668 Phaseolus vulgaris
Phvul.008G274500 5.0kb downstream 5.0kb downstream 6918 true Chr08: 61811751-61818668 Phaseolus vulgaris
Phvul.008G274500 5.0kb downstream 5.0kb downstream 5000 false Chr08: 61811751-61816750 Phaseolus vulgaris
Phvul.008G274500 10.0kb upstream 10.0kb upstream 11918 true Chr08: 61816751-61828668 Phaseolus vulgaris
Phvul.008G274500 10.0kb upstream 10.0kb upstream 10000 false Chr08: 61818669-61828668 Phaseolus vulgaris
Phvul.008G274500 10.0kb downstream 10.0kb downstream 11918 true Chr08: 61806751-61818668 Phaseolus vulgaris
Phvul.008G274500 10.0kb downstream 10.0kb downstream 10000 false Chr08: 61806751-61816750 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301088 5265 Fabidae View MSA
124063912 5270 Rosid View MSA
123749195 5271 Pentapetalae View MSA
122790493 5272 Eudicot View MSA
122044127 5273 Angiosperm View MSA
121349441 5274 Embryophyte View MSA
123428013 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 42.8487 0.0 111.706 High  
cufflinks 48.3159 0.0 125.406 High  
cufflinks 31.2888 0.0 82.8129    
cufflinks 63.6966 0.0 164.698 High High
cufflinks 44.0006 0.0 114.798 High  
cufflinks 28.0153 0.0 74.8092   Low
cufflinks 27.9813 0.0 74.6727 High Low
cufflinks 29.6572 0.0 78.8291 High  
cufflinks 36.8908 0.0 96.7334 High  
cufflinks 32.8199 0.0 86.8695    
cufflinks 50.2582 0.0 130.373 High  

0 Strain