Gene : Phvul.008G275100 P. vulgaris v2.1
Defline:  (1 of 2) PTHR13902:SF44 - SERINE/THREONINE-PROTEIN KINASE WNK11-RELATED Genomic Order:  2764
Name:  ? Phvul.008G275100 Secondary Identifier:  ? PAC:37157908
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G275100 0.5kb upstream 0.5kb upstream 3058 true Chr08: 61858296-61861353 Phaseolus vulgaris
Phvul.008G275100 0.5kb upstream 0.5kb upstream 500 false Chr08: 61860854-61861353 Phaseolus vulgaris
Phvul.008G275100 0.5kb downstream 0.5kb downstream 3058 true Chr08: 61857796-61860853 Phaseolus vulgaris
Phvul.008G275100 0.5kb downstream 0.5kb downstream 500 false Chr08: 61857796-61858295 Phaseolus vulgaris
Phvul.008G275100 1.0kb upstream 1.0kb upstream 3558 true Chr08: 61858296-61861853 Phaseolus vulgaris
Phvul.008G275100 1.0kb upstream 1.0kb upstream 1000 false Chr08: 61860854-61861853 Phaseolus vulgaris
Phvul.008G275100 1.0kb downstream 1.0kb downstream 3558 true Chr08: 61857296-61860853 Phaseolus vulgaris
Phvul.008G275100 1.0kb downstream 1.0kb downstream 1000 false Chr08: 61857296-61858295 Phaseolus vulgaris
Phvul.008G275100 2.0kb upstream 2.0kb upstream 4558 true Chr08: 61858296-61862853 Phaseolus vulgaris
Phvul.008G275100 2.0kb upstream 2.0kb upstream 2000 false Chr08: 61860854-61862853 Phaseolus vulgaris
Phvul.008G275100 2.0kb downstream 2.0kb downstream 4558 true Chr08: 61856296-61860853 Phaseolus vulgaris
Phvul.008G275100 2.0kb downstream 2.0kb downstream 2000 false Chr08: 61856296-61858295 Phaseolus vulgaris
Phvul.008G275100 5.0kb upstream 5.0kb upstream 7558 true Chr08: 61858296-61865853 Phaseolus vulgaris
Phvul.008G275100 5.0kb upstream 5.0kb upstream 5000 false Chr08: 61860854-61865853 Phaseolus vulgaris
Phvul.008G275100 5.0kb downstream 5.0kb downstream 7558 true Chr08: 61853296-61860853 Phaseolus vulgaris
Phvul.008G275100 5.0kb downstream 5.0kb downstream 5000 false Chr08: 61853296-61858295 Phaseolus vulgaris
Phvul.008G275100 10.0kb upstream 10.0kb upstream 12558 true Chr08: 61858296-61870853 Phaseolus vulgaris
Phvul.008G275100 10.0kb upstream 10.0kb upstream 10000 false Chr08: 61860854-61870853 Phaseolus vulgaris
Phvul.008G275100 10.0kb downstream 10.0kb downstream 12558 true Chr08: 61848296-61860853 Phaseolus vulgaris
Phvul.008G275100 10.0kb downstream 10.0kb downstream 10000 false Chr08: 61848296-61858295 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311250 5265 Fabidae View MSA
124070619 5270 Rosid View MSA
123752470 5271 Pentapetalae View MSA
122795934 5272 Eudicot View MSA
122051434 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.18705 0.0 20.3092    
cufflinks 11.5233 0.0 31.168    
cufflinks 4.24148 0.0 12.6134   Low
cufflinks 5.59989 0.0 16.3169   Low
cufflinks 11.9304 0.0 32.2919    
cufflinks 5.76593 0.0 16.6083   Low
cufflinks 31.0996 0.0 80.3885 High High
cufflinks 12.4511 0.0 33.474    
cufflinks 18.6254 0.0 48.7849    
cufflinks 17.8241 0.0 46.803    
cufflinks 16.7854 0.0 44.2773    

0 Strain