Gene : Phvul.008G275200 P. vulgaris v2.1
Defline:  (1 of 2) PTHR31791:SF13 - FRIGIDA-LIKE PROTEIN 5 Genomic Order:  2765
Name:  ? Phvul.008G275200 Secondary Identifier:  ? PAC:37158950
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G275200 0.5kb upstream 0.5kb upstream 3609 true Chr08: 61868346-61871954 Phaseolus vulgaris
Phvul.008G275200 0.5kb upstream 0.5kb upstream 500 false Chr08: 61868346-61868845 Phaseolus vulgaris
Phvul.008G275200 0.5kb downstream 0.5kb downstream 3609 true Chr08: 61868846-61872454 Phaseolus vulgaris
Phvul.008G275200 0.5kb downstream 0.5kb downstream 500 false Chr08: 61871955-61872454 Phaseolus vulgaris
Phvul.008G275200 1.0kb upstream 1.0kb upstream 4109 true Chr08: 61867846-61871954 Phaseolus vulgaris
Phvul.008G275200 1.0kb upstream 1.0kb upstream 1000 false Chr08: 61867846-61868845 Phaseolus vulgaris
Phvul.008G275200 1.0kb downstream 1.0kb downstream 4109 true Chr08: 61868846-61872954 Phaseolus vulgaris
Phvul.008G275200 1.0kb downstream 1.0kb downstream 1000 false Chr08: 61871955-61872954 Phaseolus vulgaris
Phvul.008G275200 2.0kb upstream 2.0kb upstream 5109 true Chr08: 61866846-61871954 Phaseolus vulgaris
Phvul.008G275200 2.0kb upstream 2.0kb upstream 2000 false Chr08: 61866846-61868845 Phaseolus vulgaris
Phvul.008G275200 2.0kb downstream 2.0kb downstream 5109 true Chr08: 61868846-61873954 Phaseolus vulgaris
Phvul.008G275200 2.0kb downstream 2.0kb downstream 2000 false Chr08: 61871955-61873954 Phaseolus vulgaris
Phvul.008G275200 5.0kb upstream 5.0kb upstream 8109 true Chr08: 61863846-61871954 Phaseolus vulgaris
Phvul.008G275200 5.0kb upstream 5.0kb upstream 5000 false Chr08: 61863846-61868845 Phaseolus vulgaris
Phvul.008G275200 5.0kb downstream 5.0kb downstream 8109 true Chr08: 61868846-61876954 Phaseolus vulgaris
Phvul.008G275200 5.0kb downstream 5.0kb downstream 5000 false Chr08: 61871955-61876954 Phaseolus vulgaris
Phvul.008G275200 10.0kb upstream 10.0kb upstream 13109 true Chr08: 61858846-61871954 Phaseolus vulgaris
Phvul.008G275200 10.0kb upstream 10.0kb upstream 10000 false Chr08: 61858846-61868845 Phaseolus vulgaris
Phvul.008G275200 10.0kb downstream 10.0kb downstream 13109 true Chr08: 61868846-61881954 Phaseolus vulgaris
Phvul.008G275200 10.0kb downstream 10.0kb downstream 10000 false Chr08: 61871955-61881954 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313510 5265 Fabidae View MSA
124072897 5270 Rosid View MSA
123741015 5271 Pentapetalae View MSA
122795482 5272 Eudicot View MSA
122048785 5273 Angiosperm View MSA
121311111 5274 Embryophyte View MSA
123348454 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.81584 0.0 5.73639   Low
cufflinks 3.81384 0.0 11.0651    
cufflinks 3.76034 0.0 10.9369    
cufflinks 1.95288 0.0 6.11328   Low
cufflinks 4.31373 0.0 12.3626    
cufflinks 5.1408 0.0 14.4965   High
cufflinks 3.52165 0.0 10.2975    
cufflinks 4.55143 0.0 12.9763    
cufflinks 3.4588 0.0 10.1479    
cufflinks 2.36121 0.0 7.23418    
cufflinks 3.62465 0.0 10.5861    

0 Strain