Gene : Phvul.008G278400 P. vulgaris v2.1
Defline:  (1 of 1) PTHR11003//PTHR11003:SF135 - POTASSIUM CHANNEL, SUBFAMILY K // SUBFAMILY NOT NAMED Genomic Order:  2801
Name:  ? Phvul.008G278400 Secondary Identifier:  ? PAC:37160629
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G278400 0.5kb upstream 0.5kb upstream 3436 true Chr08: 62040079-62043514 Phaseolus vulgaris
Phvul.008G278400 0.5kb upstream 0.5kb upstream 500 false Chr08: 62040079-62040578 Phaseolus vulgaris
Phvul.008G278400 0.5kb downstream 0.5kb downstream 3436 true Chr08: 62040579-62044014 Phaseolus vulgaris
Phvul.008G278400 0.5kb downstream 0.5kb downstream 500 false Chr08: 62043515-62044014 Phaseolus vulgaris
Phvul.008G278400 1.0kb upstream 1.0kb upstream 3936 true Chr08: 62039579-62043514 Phaseolus vulgaris
Phvul.008G278400 1.0kb upstream 1.0kb upstream 1000 false Chr08: 62039579-62040578 Phaseolus vulgaris
Phvul.008G278400 1.0kb downstream 1.0kb downstream 3936 true Chr08: 62040579-62044514 Phaseolus vulgaris
Phvul.008G278400 1.0kb downstream 1.0kb downstream 1000 false Chr08: 62043515-62044514 Phaseolus vulgaris
Phvul.008G278400 2.0kb upstream 2.0kb upstream 4936 true Chr08: 62038579-62043514 Phaseolus vulgaris
Phvul.008G278400 2.0kb upstream 2.0kb upstream 2000 false Chr08: 62038579-62040578 Phaseolus vulgaris
Phvul.008G278400 2.0kb downstream 2.0kb downstream 4936 true Chr08: 62040579-62045514 Phaseolus vulgaris
Phvul.008G278400 2.0kb downstream 2.0kb downstream 2000 false Chr08: 62043515-62045514 Phaseolus vulgaris
Phvul.008G278400 5.0kb upstream 5.0kb upstream 7936 true Chr08: 62035579-62043514 Phaseolus vulgaris
Phvul.008G278400 5.0kb upstream 5.0kb upstream 5000 false Chr08: 62035579-62040578 Phaseolus vulgaris
Phvul.008G278400 5.0kb downstream 5.0kb downstream 7936 true Chr08: 62040579-62048514 Phaseolus vulgaris
Phvul.008G278400 5.0kb downstream 5.0kb downstream 5000 false Chr08: 62043515-62048514 Phaseolus vulgaris
Phvul.008G278400 10.0kb upstream 10.0kb upstream 12936 true Chr08: 62030579-62043514 Phaseolus vulgaris
Phvul.008G278400 10.0kb upstream 10.0kb upstream 10000 false Chr08: 62030579-62040578 Phaseolus vulgaris
Phvul.008G278400 10.0kb downstream 10.0kb downstream 12936 true Chr08: 62040579-62053514 Phaseolus vulgaris
Phvul.008G278400 10.0kb downstream 10.0kb downstream 10000 false Chr08: 62043515-62053514 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302560 5265 Fabidae View MSA
124070017 5270 Rosid View MSA
123748473 5271 Pentapetalae View MSA
122795341 5272 Eudicot View MSA
122044893 5273 Angiosperm View MSA
121351714 5274 Embryophyte View MSA
123382287 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.70143 0.0 8.5766    
cufflinks 4.46888 0.0 13.4458   High
cufflinks 3.62805 0.0 11.1178    
cufflinks 4.18435 0.0 12.7971    
cufflinks 2.92319 0.0 9.35401    
cufflinks 3.72279 0.0 11.4169    
cufflinks 2.62368 0.0 8.3994   Low
cufflinks 2.31487 0.0 7.46177   Low
cufflinks 3.46898 0.0 10.7898    
cufflinks 3.57292 0.0 11.0786    
cufflinks 5.05196 0.0 15.1323   High

0 Strain