Gene : Phvul.008G278800 P. vulgaris v2.1
Defline:  (1 of 3) PTHR35708:SF1 - GB Genomic Order:  2805
Name:  ? Phvul.008G278800 Secondary Identifier:  ? PAC:37158043
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G278800 0.5kb upstream 0.5kb upstream 1223 true Chr08: 62054272-62055494 Phaseolus vulgaris
Phvul.008G278800 0.5kb upstream 0.5kb upstream 500 false Chr08: 62054272-62054771 Phaseolus vulgaris
Phvul.008G278800 0.5kb downstream 0.5kb downstream 1223 true Chr08: 62054772-62055994 Phaseolus vulgaris
Phvul.008G278800 0.5kb downstream 0.5kb downstream 500 false Chr08: 62055495-62055994 Phaseolus vulgaris
Phvul.008G278800 1.0kb upstream 1.0kb upstream 1723 true Chr08: 62053772-62055494 Phaseolus vulgaris
Phvul.008G278800 1.0kb upstream 1.0kb upstream 1000 false Chr08: 62053772-62054771 Phaseolus vulgaris
Phvul.008G278800 1.0kb downstream 1.0kb downstream 1723 true Chr08: 62054772-62056494 Phaseolus vulgaris
Phvul.008G278800 1.0kb downstream 1.0kb downstream 1000 false Chr08: 62055495-62056494 Phaseolus vulgaris
Phvul.008G278800 2.0kb upstream 2.0kb upstream 2723 true Chr08: 62052772-62055494 Phaseolus vulgaris
Phvul.008G278800 2.0kb upstream 2.0kb upstream 2000 false Chr08: 62052772-62054771 Phaseolus vulgaris
Phvul.008G278800 2.0kb downstream 2.0kb downstream 2723 true Chr08: 62054772-62057494 Phaseolus vulgaris
Phvul.008G278800 2.0kb downstream 2.0kb downstream 2000 false Chr08: 62055495-62057494 Phaseolus vulgaris
Phvul.008G278800 5.0kb upstream 5.0kb upstream 5723 true Chr08: 62049772-62055494 Phaseolus vulgaris
Phvul.008G278800 5.0kb upstream 5.0kb upstream 5000 false Chr08: 62049772-62054771 Phaseolus vulgaris
Phvul.008G278800 5.0kb downstream 5.0kb downstream 5723 true Chr08: 62054772-62060494 Phaseolus vulgaris
Phvul.008G278800 5.0kb downstream 5.0kb downstream 5000 false Chr08: 62055495-62060494 Phaseolus vulgaris
Phvul.008G278800 10.0kb upstream 10.0kb upstream 10723 true Chr08: 62044772-62055494 Phaseolus vulgaris
Phvul.008G278800 10.0kb upstream 10.0kb upstream 10000 false Chr08: 62044772-62054771 Phaseolus vulgaris
Phvul.008G278800 10.0kb downstream 10.0kb downstream 10723 true Chr08: 62054772-62065494 Phaseolus vulgaris
Phvul.008G278800 10.0kb downstream 10.0kb downstream 10000 false Chr08: 62055495-62065494 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298594 5265 Fabidae View MSA
124070540 5270 Rosid View MSA
123748172 5271 Pentapetalae View MSA
122794330 5272 Eudicot View MSA
122044423 5273 Angiosperm View MSA
121310293 5274 Embryophyte View MSA
123347819 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.070103 0.0 0.347431 Low Low
cufflinks 0.065931 0.0 0.329301 Low Low
cufflinks 0.231533 0.0 1.00913 Low  
cufflinks 0.264904 0.0 1.14874 Low  
cufflinks 0.381728 0.0 1.60992 Low High
cufflinks 0.359975 0.0 1.51307 Low High
cufflinks 0.156037 0.0 0.710436 Low  
cufflinks 0.0547289 0.0 0.277106 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.075958 0.0 0.374931 Low  
cufflinks 0.297981 0.0 1.28243 Low  

0 Strain