Gene : Phvul.008G276000 P. vulgaris v2.1
Defline:  (1 of 1) PTHR22777 - HEMOLYSIN-RELATED Genomic Order:  2773
Name:  ? Phvul.008G276000 Secondary Identifier:  ? PAC:37160166
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G276000 0.5kb upstream 0.5kb upstream 8497 true Chr08: 61915574-61924070 Phaseolus vulgaris
Phvul.008G276000 0.5kb upstream 0.5kb upstream 500 false Chr08: 61923571-61924070 Phaseolus vulgaris
Phvul.008G276000 0.5kb downstream 0.5kb downstream 8497 true Chr08: 61915074-61923570 Phaseolus vulgaris
Phvul.008G276000 0.5kb downstream 0.5kb downstream 500 false Chr08: 61915074-61915573 Phaseolus vulgaris
Phvul.008G276000 1.0kb upstream 1.0kb upstream 8997 true Chr08: 61915574-61924570 Phaseolus vulgaris
Phvul.008G276000 1.0kb upstream 1.0kb upstream 1000 false Chr08: 61923571-61924570 Phaseolus vulgaris
Phvul.008G276000 1.0kb downstream 1.0kb downstream 8997 true Chr08: 61914574-61923570 Phaseolus vulgaris
Phvul.008G276000 1.0kb downstream 1.0kb downstream 1000 false Chr08: 61914574-61915573 Phaseolus vulgaris
Phvul.008G276000 2.0kb upstream 2.0kb upstream 9997 true Chr08: 61915574-61925570 Phaseolus vulgaris
Phvul.008G276000 2.0kb upstream 2.0kb upstream 2000 false Chr08: 61923571-61925570 Phaseolus vulgaris
Phvul.008G276000 2.0kb downstream 2.0kb downstream 9997 true Chr08: 61913574-61923570 Phaseolus vulgaris
Phvul.008G276000 2.0kb downstream 2.0kb downstream 2000 false Chr08: 61913574-61915573 Phaseolus vulgaris
Phvul.008G276000 5.0kb upstream 5.0kb upstream 12997 true Chr08: 61915574-61928570 Phaseolus vulgaris
Phvul.008G276000 5.0kb upstream 5.0kb upstream 5000 false Chr08: 61923571-61928570 Phaseolus vulgaris
Phvul.008G276000 5.0kb downstream 5.0kb downstream 12997 true Chr08: 61910574-61923570 Phaseolus vulgaris
Phvul.008G276000 5.0kb downstream 5.0kb downstream 5000 false Chr08: 61910574-61915573 Phaseolus vulgaris
Phvul.008G276000 10.0kb upstream 10.0kb upstream 17997 true Chr08: 61915574-61933570 Phaseolus vulgaris
Phvul.008G276000 10.0kb upstream 10.0kb upstream 10000 false Chr08: 61923571-61933570 Phaseolus vulgaris
Phvul.008G276000 10.0kb downstream 10.0kb downstream 17997 true Chr08: 61905574-61923570 Phaseolus vulgaris
Phvul.008G276000 10.0kb downstream 10.0kb downstream 10000 false Chr08: 61905574-61915573 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301849 5265 Fabidae View MSA
124069091 5270 Rosid View MSA
123736902 5271 Pentapetalae View MSA
122787819 5272 Eudicot View MSA
122045574 5273 Angiosperm View MSA
121346581 5274 Embryophyte View MSA
123426941 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.9921 0.0 31.071   Low
cufflinks 22.3701 0.0 58.1725    
cufflinks 38.0652 0.0 102.398   High
cufflinks 20.8648 0.0 54.0113    
cufflinks 16.0246 0.0 41.4217    
cufflinks 20.7853 0.0 53.938    
cufflinks 16.915 0.0 43.7361    
cufflinks 22.8504 0.0 59.5647    
cufflinks 20.3083 0.0 52.6202    
cufflinks 20.6458 0.0 53.551    
cufflinks 15.3954 0.0 39.7983    

0 Strain