Gene : Phvul.008G280400 P. vulgaris v2.1
Defline:  (1 of 2) PTHR22601:SF8 - OLIGOPEPTIDE TRANSPORTER 1-RELATED Genomic Order:  2823
Name:  ? Phvul.008G280400 Secondary Identifier:  ? PAC:37159527
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G280400 0.5kb upstream 0.5kb upstream 4434 true Chr08: 62168985-62173418 Phaseolus vulgaris
Phvul.008G280400 0.5kb upstream 0.5kb upstream 500 false Chr08: 62168985-62169484 Phaseolus vulgaris
Phvul.008G280400 0.5kb downstream 0.5kb downstream 4434 true Chr08: 62169485-62173918 Phaseolus vulgaris
Phvul.008G280400 0.5kb downstream 0.5kb downstream 500 false Chr08: 62173419-62173918 Phaseolus vulgaris
Phvul.008G280400 1.0kb upstream 1.0kb upstream 4934 true Chr08: 62168485-62173418 Phaseolus vulgaris
Phvul.008G280400 1.0kb upstream 1.0kb upstream 1000 false Chr08: 62168485-62169484 Phaseolus vulgaris
Phvul.008G280400 1.0kb downstream 1.0kb downstream 4934 true Chr08: 62169485-62174418 Phaseolus vulgaris
Phvul.008G280400 1.0kb downstream 1.0kb downstream 1000 false Chr08: 62173419-62174418 Phaseolus vulgaris
Phvul.008G280400 2.0kb upstream 2.0kb upstream 5934 true Chr08: 62167485-62173418 Phaseolus vulgaris
Phvul.008G280400 2.0kb upstream 2.0kb upstream 2000 false Chr08: 62167485-62169484 Phaseolus vulgaris
Phvul.008G280400 2.0kb downstream 2.0kb downstream 5934 true Chr08: 62169485-62175418 Phaseolus vulgaris
Phvul.008G280400 2.0kb downstream 2.0kb downstream 2000 false Chr08: 62173419-62175418 Phaseolus vulgaris
Phvul.008G280400 5.0kb upstream 5.0kb upstream 8934 true Chr08: 62164485-62173418 Phaseolus vulgaris
Phvul.008G280400 5.0kb upstream 5.0kb upstream 5000 false Chr08: 62164485-62169484 Phaseolus vulgaris
Phvul.008G280400 5.0kb downstream 5.0kb downstream 8934 true Chr08: 62169485-62178418 Phaseolus vulgaris
Phvul.008G280400 5.0kb downstream 5.0kb downstream 5000 false Chr08: 62173419-62178418 Phaseolus vulgaris
Phvul.008G280400 10.0kb upstream 10.0kb upstream 13934 true Chr08: 62159485-62173418 Phaseolus vulgaris
Phvul.008G280400 10.0kb upstream 10.0kb upstream 10000 false Chr08: 62159485-62169484 Phaseolus vulgaris
Phvul.008G280400 10.0kb downstream 10.0kb downstream 13934 true Chr08: 62169485-62183418 Phaseolus vulgaris
Phvul.008G280400 10.0kb downstream 10.0kb downstream 10000 false Chr08: 62173419-62183418 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309897 5265 Fabidae View MSA
124065533 5270 Rosid View MSA
123750200 5271 Pentapetalae View MSA
122797569 5272 Eudicot View MSA
122049856 5273 Angiosperm View MSA
121351141 5274 Embryophyte View MSA
123382023 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.439274 0.0 1.58621    
cufflinks 1.17077 0.0 3.80965    
cufflinks 2.16923 0.0 6.56164    
cufflinks 0.124821 0.0 0.50043 Low Low
cufflinks 1.76614 0.0 5.49047    
cufflinks 5.45526 0.0 15.0361   High
cufflinks 0.509664 0.0 1.81677 Low  
cufflinks 3.46085 0.0 9.93464   High
cufflinks 0.0491589 0.0 0.213494 Low Low
cufflinks 0.0701804 0.0 0.29477 Low Low
cufflinks 1.78031 0.0 5.54175    

0 Strain