Gene : Phvul.L002402 P. vulgaris v2.1
Defline:  (1 of 19) PTHR22763:SF46 - PROTEIN SAN1 Genomic Order:  9
Name:  ? Phvul.L002402 Secondary Identifier:  ? PAC:37163898
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.L002402 0.5kb upstream 0.5kb upstream 938 true scaffold_104: 78717-79654 Phaseolus vulgaris
Phvul.L002402 0.5kb upstream 0.5kb upstream 500 false scaffold_104: 79155-79654 Phaseolus vulgaris
Phvul.L002402 0.5kb downstream 0.5kb downstream 938 true scaffold_104: 78217-79154 Phaseolus vulgaris
Phvul.L002402 0.5kb downstream 0.5kb downstream 500 false scaffold_104: 78217-78716 Phaseolus vulgaris
Phvul.L002402 1.0kb upstream 1.0kb upstream 1438 true scaffold_104: 78717-80154 Phaseolus vulgaris
Phvul.L002402 1.0kb upstream 1.0kb upstream 1000 false scaffold_104: 79155-80154 Phaseolus vulgaris
Phvul.L002402 1.0kb downstream 1.0kb downstream 1438 true scaffold_104: 77717-79154 Phaseolus vulgaris
Phvul.L002402 1.0kb downstream 1.0kb downstream 1000 false scaffold_104: 77717-78716 Phaseolus vulgaris
Phvul.L002402 2.0kb upstream 2.0kb upstream 2438 true scaffold_104: 78717-81154 Phaseolus vulgaris
Phvul.L002402 2.0kb upstream 2.0kb upstream 2000 false scaffold_104: 79155-81154 Phaseolus vulgaris
Phvul.L002402 2.0kb downstream 2.0kb downstream 2438 true scaffold_104: 76717-79154 Phaseolus vulgaris
Phvul.L002402 2.0kb downstream 2.0kb downstream 2000 false scaffold_104: 76717-78716 Phaseolus vulgaris
Phvul.L002402 5.0kb upstream 5.0kb upstream 5438 true scaffold_104: 78717-84154 Phaseolus vulgaris
Phvul.L002402 5.0kb upstream 5.0kb upstream 5000 false scaffold_104: 79155-84154 Phaseolus vulgaris
Phvul.L002402 5.0kb downstream 5.0kb downstream 5438 true scaffold_104: 73717-79154 Phaseolus vulgaris
Phvul.L002402 5.0kb downstream 5.0kb downstream 5000 false scaffold_104: 73717-78716 Phaseolus vulgaris
Phvul.L002402 10.0kb upstream 10.0kb upstream 10270 true scaffold_104: 78717-88986 Phaseolus vulgaris
Phvul.L002402 10.0kb upstream 10.0kb upstream 9832 false scaffold_104: 79155-88986 Phaseolus vulgaris
Phvul.L002402 10.0kb downstream 10.0kb downstream 10438 true scaffold_104: 68717-79154 Phaseolus vulgaris
Phvul.L002402 10.0kb downstream 10.0kb downstream 10000 false scaffold_104: 68717-78716 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314339 5265 Fabidae View MSA
124039524 5270 Rosid View MSA
123753333 5271 Pentapetalae View MSA
122775058 5272 Eudicot View MSA
122051603 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121351603 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0142889 0.0 0.0949801 Low  

0 Strain