Gene : Phvul.L001232 P. vulgaris v2.1
Defline:  (1 of 1) PTHR14269:SF15 - HYDROLASE FAMILY PROTEIN / HAD-SUPERFAMILY PROTEIN Genomic Order:  8
Name:  ? Phvul.L001232 Secondary Identifier:  ? PAC:37148510
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.L001232 0.5kb upstream 0.5kb upstream 4692 true scaffold_30: 120595-125286 Phaseolus vulgaris
Phvul.L001232 0.5kb upstream 0.5kb upstream 500 false scaffold_30: 120595-121094 Phaseolus vulgaris
Phvul.L001232 0.5kb downstream 0.5kb downstream 4692 true scaffold_30: 121095-125786 Phaseolus vulgaris
Phvul.L001232 0.5kb downstream 0.5kb downstream 500 false scaffold_30: 125287-125786 Phaseolus vulgaris
Phvul.L001232 1.0kb upstream 1.0kb upstream 5192 true scaffold_30: 120095-125286 Phaseolus vulgaris
Phvul.L001232 1.0kb upstream 1.0kb upstream 1000 false scaffold_30: 120095-121094 Phaseolus vulgaris
Phvul.L001232 1.0kb downstream 1.0kb downstream 5192 true scaffold_30: 121095-126286 Phaseolus vulgaris
Phvul.L001232 1.0kb downstream 1.0kb downstream 1000 false scaffold_30: 125287-126286 Phaseolus vulgaris
Phvul.L001232 2.0kb upstream 2.0kb upstream 6192 true scaffold_30: 119095-125286 Phaseolus vulgaris
Phvul.L001232 2.0kb upstream 2.0kb upstream 2000 false scaffold_30: 119095-121094 Phaseolus vulgaris
Phvul.L001232 2.0kb downstream 2.0kb downstream 6192 true scaffold_30: 121095-127286 Phaseolus vulgaris
Phvul.L001232 2.0kb downstream 2.0kb downstream 2000 false scaffold_30: 125287-127286 Phaseolus vulgaris
Phvul.L001232 5.0kb upstream 5.0kb upstream 9192 true scaffold_30: 116095-125286 Phaseolus vulgaris
Phvul.L001232 5.0kb upstream 5.0kb upstream 5000 false scaffold_30: 116095-121094 Phaseolus vulgaris
Phvul.L001232 5.0kb downstream 5.0kb downstream 9192 true scaffold_30: 121095-130286 Phaseolus vulgaris
Phvul.L001232 5.0kb downstream 5.0kb downstream 5000 false scaffold_30: 125287-130286 Phaseolus vulgaris
Phvul.L001232 10.0kb upstream 10.0kb upstream 14192 true scaffold_30: 111095-125286 Phaseolus vulgaris
Phvul.L001232 10.0kb upstream 10.0kb upstream 10000 false scaffold_30: 111095-121094 Phaseolus vulgaris
Phvul.L001232 10.0kb downstream 10.0kb downstream 14192 true scaffold_30: 121095-135286 Phaseolus vulgaris
Phvul.L001232 10.0kb downstream 10.0kb downstream 10000 false scaffold_30: 125287-135286 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041320 5273 Angiosperm View MSA
122301690 5265 Fabidae View MSA
124072066 5270 Rosid View MSA
123752870 5271 Pentapetalae View MSA
122792531 5272 Eudicot View MSA
121345868 5274 Embryophyte View MSA
123424611 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.66601 0.0 5.52957    
cufflinks 2.19707 0.0 7.09851    
cufflinks 2.42546 0.0 7.73162   High
cufflinks 2.18504 0.0 7.10012    
cufflinks 1.67603 0.0 5.61187    
cufflinks 2.3232 0.0 7.45861    
cufflinks 1.41564 0.0 4.80391    
cufflinks 1.70089 0.0 5.63281    
cufflinks 0.867022 0.0 3.10527   Low
cufflinks 1.55626 0.0 5.23615    
cufflinks 1.95336 0.0 6.42221    

0 Strain