Gene : Phvul.L002619 P. vulgaris v2.1
Defline:  (1 of 1) K03539 - ribonuclease P/MRP protein subunit RPP1 (RPP1, RPP30) Genomic Order:  17
Name:  ? Phvul.L002619 Secondary Identifier:  ? PAC:37148506
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.L002619 0.5kb upstream 0.5kb upstream 5972 true scaffold_30: 204547-210518 Phaseolus vulgaris
Phvul.L002619 0.5kb upstream 0.5kb upstream 500 false scaffold_30: 210019-210518 Phaseolus vulgaris
Phvul.L002619 0.5kb downstream 0.5kb downstream 5972 true scaffold_30: 204047-210018 Phaseolus vulgaris
Phvul.L002619 0.5kb downstream 0.5kb downstream 500 false scaffold_30: 204047-204546 Phaseolus vulgaris
Phvul.L002619 1.0kb upstream 1.0kb upstream 6472 true scaffold_30: 204547-211018 Phaseolus vulgaris
Phvul.L002619 1.0kb upstream 1.0kb upstream 1000 false scaffold_30: 210019-211018 Phaseolus vulgaris
Phvul.L002619 1.0kb downstream 1.0kb downstream 6472 true scaffold_30: 203547-210018 Phaseolus vulgaris
Phvul.L002619 1.0kb downstream 1.0kb downstream 1000 false scaffold_30: 203547-204546 Phaseolus vulgaris
Phvul.L002619 2.0kb upstream 2.0kb upstream 7472 true scaffold_30: 204547-212018 Phaseolus vulgaris
Phvul.L002619 2.0kb upstream 2.0kb upstream 2000 false scaffold_30: 210019-212018 Phaseolus vulgaris
Phvul.L002619 2.0kb downstream 2.0kb downstream 7472 true scaffold_30: 202547-210018 Phaseolus vulgaris
Phvul.L002619 2.0kb downstream 2.0kb downstream 2000 false scaffold_30: 202547-204546 Phaseolus vulgaris
Phvul.L002619 5.0kb upstream 5.0kb upstream 10472 true scaffold_30: 204547-215018 Phaseolus vulgaris
Phvul.L002619 5.0kb upstream 5.0kb upstream 5000 false scaffold_30: 210019-215018 Phaseolus vulgaris
Phvul.L002619 5.0kb downstream 5.0kb downstream 10472 true scaffold_30: 199547-210018 Phaseolus vulgaris
Phvul.L002619 5.0kb downstream 5.0kb downstream 5000 false scaffold_30: 199547-204546 Phaseolus vulgaris
Phvul.L002619 10.0kb upstream 10.0kb upstream 15472 true scaffold_30: 204547-220018 Phaseolus vulgaris
Phvul.L002619 10.0kb upstream 10.0kb upstream 10000 false scaffold_30: 210019-220018 Phaseolus vulgaris
Phvul.L002619 10.0kb downstream 10.0kb downstream 15472 true scaffold_30: 194547-210018 Phaseolus vulgaris
Phvul.L002619 10.0kb downstream 10.0kb downstream 10000 false scaffold_30: 194547-204546 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313057 5265 Fabidae View MSA
124061915 5270 Rosid View MSA
123743808 5271 Pentapetalae View MSA
122793933 5272 Eudicot View MSA
122049297 5273 Angiosperm View MSA
121350359 5274 Embryophyte View MSA
123426490 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.19541 0.0 4.44416   Low
cufflinks 2.99456 0.0 12.7363    
cufflinks 1.98778 0.0 8.80473    
cufflinks 1.71594 0.0 5.91316    
cufflinks 2.55314 0.0 11.8196    
cufflinks 2.12942 0.0 6.99053    
cufflinks 3.15098 0.0 14.7906   High
cufflinks 2.86455 0.0 12.0823    
cufflinks 2.79644 0.0 12.0225    
cufflinks 2.82979 0.0 12.2435    
cufflinks 1.73832 0.0 9.16758    

0 Strain