Gene : Phvul.L001795 P. vulgaris v2.1
Genomic Order:  2 Name:  ? Phvul.L001795
Secondary Identifier:  ? PAC:37148532
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.L001795 0.5kb upstream 0.5kb upstream 3894 true scaffold_975: 3594-7487 Phaseolus vulgaris
Phvul.L001795 0.5kb upstream 0.5kb upstream 500 false scaffold_975: 3594-4093 Phaseolus vulgaris
Phvul.L001795 0.5kb downstream 0.5kb downstream 3894 true scaffold_975: 4094-7987 Phaseolus vulgaris
Phvul.L001795 0.5kb downstream 0.5kb downstream 500 false scaffold_975: 7488-7987 Phaseolus vulgaris
Phvul.L001795 1.0kb upstream 1.0kb upstream 4394 true scaffold_975: 3094-7487 Phaseolus vulgaris
Phvul.L001795 1.0kb upstream 1.0kb upstream 1000 false scaffold_975: 3094-4093 Phaseolus vulgaris
Phvul.L001795 1.0kb downstream 1.0kb downstream 4027 true scaffold_975: 4094-8120 Phaseolus vulgaris
Phvul.L001795 1.0kb downstream 1.0kb downstream 633 false scaffold_975: 7488-8120 Phaseolus vulgaris
Phvul.L001795 2.0kb upstream 2.0kb upstream 5394 true scaffold_975: 2094-7487 Phaseolus vulgaris
Phvul.L001795 2.0kb upstream 2.0kb upstream 2000 false scaffold_975: 2094-4093 Phaseolus vulgaris
Phvul.L001795 2.0kb downstream 2.0kb downstream 4027 true scaffold_975: 4094-8120 Phaseolus vulgaris
Phvul.L001795 2.0kb downstream 2.0kb downstream 633 false scaffold_975: 7488-8120 Phaseolus vulgaris
Phvul.L001795 5.0kb upstream 5.0kb upstream 7487 true scaffold_975: 1-7487 Phaseolus vulgaris
Phvul.L001795 5.0kb upstream 5.0kb upstream 4093 false scaffold_975: 1-4093 Phaseolus vulgaris
Phvul.L001795 5.0kb downstream 5.0kb downstream 4027 true scaffold_975: 4094-8120 Phaseolus vulgaris
Phvul.L001795 5.0kb downstream 5.0kb downstream 633 false scaffold_975: 7488-8120 Phaseolus vulgaris
Phvul.L001795 10.0kb upstream 10.0kb upstream 7487 true scaffold_975: 1-7487 Phaseolus vulgaris
Phvul.L001795 10.0kb upstream 10.0kb upstream 4093 false scaffold_975: 1-4093 Phaseolus vulgaris
Phvul.L001795 10.0kb downstream 10.0kb downstream 4027 true scaffold_975: 4094-8120 Phaseolus vulgaris
Phvul.L001795 10.0kb downstream 10.0kb downstream 633 false scaffold_975: 7488-8120 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314102 5265 Fabidae View MSA
124071279 5270 Rosid View MSA
123741561 5271 Pentapetalae View MSA
122793729 5272 Eudicot View MSA
122046914 5273 Angiosperm View MSA
121346095 5274 Embryophyte View MSA
123380327 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.9247 0.0 50.3204   Low
cufflinks 28.216 0.0 73.4666    
cufflinks 28.1649 0.0 73.2859    
cufflinks 62.9191 0.0 163.419 High High
cufflinks 25.5531 0.0 67.022    
cufflinks 27.3995 0.0 71.3884    
cufflinks 26.4617 0.0 69.0484    
cufflinks 24.5184 0.0 64.0913    
cufflinks 30.95 0.0 80.4131 High  
cufflinks 23.1094 0.0 60.7632    
cufflinks 31.8688 0.0 82.7463    

0 Strain