Gene : Phvul.011G017900 P. vulgaris v2.1
Defline:  (1 of 28) 2.3.1.48 - Histone acetyltransferase Genomic Order:  181
Name:  ? Phvul.011G017900 Secondary Identifier:  ? PAC:37157258
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G017900 0.5kb upstream 0.5kb upstream 11052 true Chr11: 1422789-1433840 Phaseolus vulgaris
Phvul.011G017900 0.5kb upstream 0.5kb upstream 500 false Chr11: 1433341-1433840 Phaseolus vulgaris
Phvul.011G017900 0.5kb downstream 0.5kb downstream 11052 true Chr11: 1422289-1433340 Phaseolus vulgaris
Phvul.011G017900 0.5kb downstream 0.5kb downstream 500 false Chr11: 1422289-1422788 Phaseolus vulgaris
Phvul.011G017900 1.0kb upstream 1.0kb upstream 11552 true Chr11: 1422789-1434340 Phaseolus vulgaris
Phvul.011G017900 1.0kb upstream 1.0kb upstream 1000 false Chr11: 1433341-1434340 Phaseolus vulgaris
Phvul.011G017900 1.0kb downstream 1.0kb downstream 11552 true Chr11: 1421789-1433340 Phaseolus vulgaris
Phvul.011G017900 1.0kb downstream 1.0kb downstream 1000 false Chr11: 1421789-1422788 Phaseolus vulgaris
Phvul.011G017900 2.0kb upstream 2.0kb upstream 12552 true Chr11: 1422789-1435340 Phaseolus vulgaris
Phvul.011G017900 2.0kb upstream 2.0kb upstream 2000 false Chr11: 1433341-1435340 Phaseolus vulgaris
Phvul.011G017900 2.0kb downstream 2.0kb downstream 12552 true Chr11: 1420789-1433340 Phaseolus vulgaris
Phvul.011G017900 2.0kb downstream 2.0kb downstream 2000 false Chr11: 1420789-1422788 Phaseolus vulgaris
Phvul.011G017900 5.0kb upstream 5.0kb upstream 15552 true Chr11: 1422789-1438340 Phaseolus vulgaris
Phvul.011G017900 5.0kb upstream 5.0kb upstream 5000 false Chr11: 1433341-1438340 Phaseolus vulgaris
Phvul.011G017900 5.0kb downstream 5.0kb downstream 15552 true Chr11: 1417789-1433340 Phaseolus vulgaris
Phvul.011G017900 5.0kb downstream 5.0kb downstream 5000 false Chr11: 1417789-1422788 Phaseolus vulgaris
Phvul.011G017900 10.0kb upstream 10.0kb upstream 20552 true Chr11: 1422789-1443340 Phaseolus vulgaris
Phvul.011G017900 10.0kb upstream 10.0kb upstream 10000 false Chr11: 1433341-1443340 Phaseolus vulgaris
Phvul.011G017900 10.0kb downstream 10.0kb downstream 20552 true Chr11: 1412789-1433340 Phaseolus vulgaris
Phvul.011G017900 10.0kb downstream 10.0kb downstream 10000 false Chr11: 1412789-1422788 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310427 5265 Fabidae View MSA
124073153 5270 Rosid View MSA
123746144 5271 Pentapetalae View MSA
122794175 5272 Eudicot View MSA
122049832 5273 Angiosperm View MSA
121311609 5274 Embryophyte View MSA
123348884 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.02412 0.0 24.629    
cufflinks 6.94869 0.0 33.366    
cufflinks 13.73 0.0 71.2063   High
cufflinks 2.46734 0.0 12.6814   Low
cufflinks 6.88315 0.0 34.934    
cufflinks 9.65799 0.0 52.3501    
cufflinks 8.14771 0.0 42.8978    
cufflinks 9.63681 0.0 50.6953    
cufflinks 7.41298 0.0 37.4897    
cufflinks 14.1998 0.0 74.1726   High
cufflinks 4.42825 0.0 24.0723    

0 Strain