Gene : Phvul.011G017200 P. vulgaris v2.1
Defline:  (1 of 2) K05928 - tocopherol O-methyltransferase (E2.1.1.95) Genomic Order:  174
Name:  ? Phvul.011G017200 Secondary Identifier:  ? PAC:37155565
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-1422 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7436 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G017200 0.5kb upstream 0.5kb upstream 3637 true Chr11: 1348032-1351668 Phaseolus vulgaris
Phvul.011G017200 0.5kb upstream 0.5kb upstream 500 false Chr11: 1351169-1351668 Phaseolus vulgaris
Phvul.011G017200 0.5kb downstream 0.5kb downstream 3637 true Chr11: 1347532-1351168 Phaseolus vulgaris
Phvul.011G017200 0.5kb downstream 0.5kb downstream 500 false Chr11: 1347532-1348031 Phaseolus vulgaris
Phvul.011G017200 1.0kb upstream 1.0kb upstream 4137 true Chr11: 1348032-1352168 Phaseolus vulgaris
Phvul.011G017200 1.0kb upstream 1.0kb upstream 1000 false Chr11: 1351169-1352168 Phaseolus vulgaris
Phvul.011G017200 1.0kb downstream 1.0kb downstream 4137 true Chr11: 1347032-1351168 Phaseolus vulgaris
Phvul.011G017200 1.0kb downstream 1.0kb downstream 1000 false Chr11: 1347032-1348031 Phaseolus vulgaris
Phvul.011G017200 2.0kb upstream 2.0kb upstream 5137 true Chr11: 1348032-1353168 Phaseolus vulgaris
Phvul.011G017200 2.0kb upstream 2.0kb upstream 2000 false Chr11: 1351169-1353168 Phaseolus vulgaris
Phvul.011G017200 2.0kb downstream 2.0kb downstream 5137 true Chr11: 1346032-1351168 Phaseolus vulgaris
Phvul.011G017200 2.0kb downstream 2.0kb downstream 2000 false Chr11: 1346032-1348031 Phaseolus vulgaris
Phvul.011G017200 5.0kb upstream 5.0kb upstream 8137 true Chr11: 1348032-1356168 Phaseolus vulgaris
Phvul.011G017200 5.0kb upstream 5.0kb upstream 5000 false Chr11: 1351169-1356168 Phaseolus vulgaris
Phvul.011G017200 5.0kb downstream 5.0kb downstream 8137 true Chr11: 1343032-1351168 Phaseolus vulgaris
Phvul.011G017200 5.0kb downstream 5.0kb downstream 5000 false Chr11: 1343032-1348031 Phaseolus vulgaris
Phvul.011G017200 10.0kb upstream 10.0kb upstream 13137 true Chr11: 1348032-1361168 Phaseolus vulgaris
Phvul.011G017200 10.0kb upstream 10.0kb upstream 10000 false Chr11: 1351169-1361168 Phaseolus vulgaris
Phvul.011G017200 10.0kb downstream 10.0kb downstream 13137 true Chr11: 1338032-1351168 Phaseolus vulgaris
Phvul.011G017200 10.0kb downstream 10.0kb downstream 10000 false Chr11: 1338032-1348031 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299089 5265 Fabidae View MSA
124067151 5270 Rosid View MSA
123747323 5271 Pentapetalae View MSA
122786433 5272 Eudicot View MSA
122044817 5273 Angiosperm View MSA
121347406 5274 Embryophyte View MSA
123427925 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 669.229 0.0 2599.13 High High
cufflinks 6.56428 0.0 18.5826    
cufflinks 54.133 0.0 141.909 High  
cufflinks 16.394 0.0 43.1576    
cufflinks 2.46824 0.0 7.79128    
cufflinks 24.2412 0.0 62.8007    
cufflinks 0.815286 0.0 2.89799   Low
cufflinks 0.319979 0.0 1.23516 Low Low
cufflinks 0.687974 0.0 2.48826   Low
cufflinks 80.6132 0.0 218.331 High  
cufflinks 3.98532 0.0 11.8759    

0 Strain