Gene : Phvul.011G018000 P. vulgaris v2.1
Defline:  (1 of 1) PTHR11695//PTHR11695:SF538 - ALCOHOL DEHYDROGENASE RELATED // SUBFAMILY NOT NAMED Genomic Order:  182
Name:  ? Phvul.011G018000 Secondary Identifier:  ? PAC:37156614
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-5486 Phaseolus vulgaris pathologic  
Pvulgaris PWY-6333 Phaseolus vulgaris pathologic  
Pvulgaris PWY66-21 Phaseolus vulgaris pathologic  
Pvulgaris PWY66-389 Phaseolus vulgaris pathologic  
Pvulgaris PWY-6802 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G018000 0.5kb upstream 0.5kb upstream 3574 true Chr11: 1438870-1442443 Phaseolus vulgaris
Phvul.011G018000 0.5kb upstream 0.5kb upstream 500 false Chr11: 1441944-1442443 Phaseolus vulgaris
Phvul.011G018000 0.5kb downstream 0.5kb downstream 3574 true Chr11: 1438370-1441943 Phaseolus vulgaris
Phvul.011G018000 0.5kb downstream 0.5kb downstream 500 false Chr11: 1438370-1438869 Phaseolus vulgaris
Phvul.011G018000 1.0kb upstream 1.0kb upstream 4074 true Chr11: 1438870-1442943 Phaseolus vulgaris
Phvul.011G018000 1.0kb upstream 1.0kb upstream 1000 false Chr11: 1441944-1442943 Phaseolus vulgaris
Phvul.011G018000 1.0kb downstream 1.0kb downstream 4074 true Chr11: 1437870-1441943 Phaseolus vulgaris
Phvul.011G018000 1.0kb downstream 1.0kb downstream 1000 false Chr11: 1437870-1438869 Phaseolus vulgaris
Phvul.011G018000 2.0kb upstream 2.0kb upstream 5074 true Chr11: 1438870-1443943 Phaseolus vulgaris
Phvul.011G018000 2.0kb upstream 2.0kb upstream 2000 false Chr11: 1441944-1443943 Phaseolus vulgaris
Phvul.011G018000 2.0kb downstream 2.0kb downstream 5074 true Chr11: 1436870-1441943 Phaseolus vulgaris
Phvul.011G018000 2.0kb downstream 2.0kb downstream 2000 false Chr11: 1436870-1438869 Phaseolus vulgaris
Phvul.011G018000 5.0kb upstream 5.0kb upstream 8074 true Chr11: 1438870-1446943 Phaseolus vulgaris
Phvul.011G018000 5.0kb upstream 5.0kb upstream 5000 false Chr11: 1441944-1446943 Phaseolus vulgaris
Phvul.011G018000 5.0kb downstream 5.0kb downstream 8074 true Chr11: 1433870-1441943 Phaseolus vulgaris
Phvul.011G018000 5.0kb downstream 5.0kb downstream 5000 false Chr11: 1433870-1438869 Phaseolus vulgaris
Phvul.011G018000 10.0kb upstream 10.0kb upstream 13074 true Chr11: 1438870-1451943 Phaseolus vulgaris
Phvul.011G018000 10.0kb upstream 10.0kb upstream 10000 false Chr11: 1441944-1451943 Phaseolus vulgaris
Phvul.011G018000 10.0kb downstream 10.0kb downstream 13074 true Chr11: 1428870-1441943 Phaseolus vulgaris
Phvul.011G018000 10.0kb downstream 10.0kb downstream 10000 false Chr11: 1428870-1438869 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313135 5265 Fabidae View MSA
124072751 5270 Rosid View MSA
123744522 5271 Pentapetalae View MSA
122796931 5272 Eudicot View MSA
122046886 5273 Angiosperm View MSA
121310668 5274 Embryophyte View MSA
123428625 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 41.4256 0.0 107.452 High  
cufflinks 22.4399 0.0 58.2897    
cufflinks 42.5936 0.0 110.753 High  
cufflinks 46.9298 0.0 121.785 High  
cufflinks 27.5287 0.0 71.2936    
cufflinks 17.8683 0.0 46.8053    
cufflinks 2.26364 0.0 7.23783   Low
cufflinks 20.8585 0.0 54.1694    
cufflinks 2.20838 0.0 7.10332   Low
cufflinks 47.0953 0.0 122.514 High  
cufflinks 11.5501 0.0 31.3791    

0 Strain