Gene : Phvul.011G020300 P. vulgaris v2.1
Defline:  (1 of 1) K03939 - NADH dehydrogenase (ubiquinone) Fe-S protein 6 (NDUFS6) Genomic Order:  205
Name:  ? Phvul.011G020300 Secondary Identifier:  ? PAC:37156218
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G020300 0.5kb upstream 0.5kb upstream 3379 true Chr11: 1584050-1587428 Phaseolus vulgaris
Phvul.011G020300 0.5kb upstream 0.5kb upstream 500 false Chr11: 1586929-1587428 Phaseolus vulgaris
Phvul.011G020300 0.5kb downstream 0.5kb downstream 3379 true Chr11: 1583550-1586928 Phaseolus vulgaris
Phvul.011G020300 0.5kb downstream 0.5kb downstream 500 false Chr11: 1583550-1584049 Phaseolus vulgaris
Phvul.011G020300 1.0kb upstream 1.0kb upstream 3879 true Chr11: 1584050-1587928 Phaseolus vulgaris
Phvul.011G020300 1.0kb upstream 1.0kb upstream 1000 false Chr11: 1586929-1587928 Phaseolus vulgaris
Phvul.011G020300 1.0kb downstream 1.0kb downstream 3879 true Chr11: 1583050-1586928 Phaseolus vulgaris
Phvul.011G020300 1.0kb downstream 1.0kb downstream 1000 false Chr11: 1583050-1584049 Phaseolus vulgaris
Phvul.011G020300 2.0kb upstream 2.0kb upstream 4879 true Chr11: 1584050-1588928 Phaseolus vulgaris
Phvul.011G020300 2.0kb upstream 2.0kb upstream 2000 false Chr11: 1586929-1588928 Phaseolus vulgaris
Phvul.011G020300 2.0kb downstream 2.0kb downstream 4879 true Chr11: 1582050-1586928 Phaseolus vulgaris
Phvul.011G020300 2.0kb downstream 2.0kb downstream 2000 false Chr11: 1582050-1584049 Phaseolus vulgaris
Phvul.011G020300 5.0kb upstream 5.0kb upstream 7879 true Chr11: 1584050-1591928 Phaseolus vulgaris
Phvul.011G020300 5.0kb upstream 5.0kb upstream 5000 false Chr11: 1586929-1591928 Phaseolus vulgaris
Phvul.011G020300 5.0kb downstream 5.0kb downstream 7879 true Chr11: 1579050-1586928 Phaseolus vulgaris
Phvul.011G020300 5.0kb downstream 5.0kb downstream 5000 false Chr11: 1579050-1584049 Phaseolus vulgaris
Phvul.011G020300 10.0kb upstream 10.0kb upstream 12879 true Chr11: 1584050-1596928 Phaseolus vulgaris
Phvul.011G020300 10.0kb upstream 10.0kb upstream 10000 false Chr11: 1586929-1596928 Phaseolus vulgaris
Phvul.011G020300 10.0kb downstream 10.0kb downstream 12879 true Chr11: 1574050-1586928 Phaseolus vulgaris
Phvul.011G020300 10.0kb downstream 10.0kb downstream 10000 false Chr11: 1574050-1584049 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301945 5265 Fabidae View MSA
124068535 5270 Rosid View MSA
123737365 5271 Pentapetalae View MSA
122786267 5272 Eudicot View MSA
122043050 5273 Angiosperm View MSA
121344521 5274 Embryophyte View MSA
123424035 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 54.432 0.0 141.858 High High
cufflinks 32.0356 0.0 86.2584    
cufflinks 38.4885 0.0 102.643 High  
cufflinks 73.1849 0.0 189.308 High High
cufflinks 29.6579 0.0 80.6873    
cufflinks 29.1248 0.0 79.0917    
cufflinks 30.3496 0.0 81.9162 High  
cufflinks 42.843 0.0 112.983 High  
cufflinks 35.2283 0.0 93.9394 High  
cufflinks 18.1389 0.0 51.3737   Low
cufflinks 29.7418 0.0 80.649    

0 Strain