Gene : Phvul.011G022500 P. vulgaris v2.1
Defline:  (1 of 1) PTHR31403:SF6 - PHOSPHOLIPASE A1-IGAMMA3, CHLOROPLASTIC Genomic Order:  228
Name:  ? Phvul.011G022500 Secondary Identifier:  ? PAC:37155827
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris LIPAS-PWY Phaseolus vulgaris pathologic  
Pvulgaris LIPASYN-PWY Phaseolus vulgaris pathologic  
Pvulgaris PWY-6803 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G022500 0.5kb upstream 0.5kb upstream 3038 true Chr11: 1762156-1765193 Phaseolus vulgaris
Phvul.011G022500 0.5kb upstream 0.5kb upstream 500 false Chr11: 1762156-1762655 Phaseolus vulgaris
Phvul.011G022500 0.5kb downstream 0.5kb downstream 3038 true Chr11: 1762656-1765693 Phaseolus vulgaris
Phvul.011G022500 0.5kb downstream 0.5kb downstream 500 false Chr11: 1765194-1765693 Phaseolus vulgaris
Phvul.011G022500 1.0kb upstream 1.0kb upstream 3538 true Chr11: 1761656-1765193 Phaseolus vulgaris
Phvul.011G022500 1.0kb upstream 1.0kb upstream 1000 false Chr11: 1761656-1762655 Phaseolus vulgaris
Phvul.011G022500 1.0kb downstream 1.0kb downstream 3538 true Chr11: 1762656-1766193 Phaseolus vulgaris
Phvul.011G022500 1.0kb downstream 1.0kb downstream 1000 false Chr11: 1765194-1766193 Phaseolus vulgaris
Phvul.011G022500 2.0kb upstream 2.0kb upstream 4538 true Chr11: 1760656-1765193 Phaseolus vulgaris
Phvul.011G022500 2.0kb upstream 2.0kb upstream 2000 false Chr11: 1760656-1762655 Phaseolus vulgaris
Phvul.011G022500 2.0kb downstream 2.0kb downstream 4538 true Chr11: 1762656-1767193 Phaseolus vulgaris
Phvul.011G022500 2.0kb downstream 2.0kb downstream 2000 false Chr11: 1765194-1767193 Phaseolus vulgaris
Phvul.011G022500 5.0kb upstream 5.0kb upstream 7538 true Chr11: 1757656-1765193 Phaseolus vulgaris
Phvul.011G022500 5.0kb upstream 5.0kb upstream 5000 false Chr11: 1757656-1762655 Phaseolus vulgaris
Phvul.011G022500 5.0kb downstream 5.0kb downstream 7538 true Chr11: 1762656-1770193 Phaseolus vulgaris
Phvul.011G022500 5.0kb downstream 5.0kb downstream 5000 false Chr11: 1765194-1770193 Phaseolus vulgaris
Phvul.011G022500 10.0kb upstream 10.0kb upstream 12538 true Chr11: 1752656-1765193 Phaseolus vulgaris
Phvul.011G022500 10.0kb upstream 10.0kb upstream 10000 false Chr11: 1752656-1762655 Phaseolus vulgaris
Phvul.011G022500 10.0kb downstream 10.0kb downstream 12538 true Chr11: 1762656-1775193 Phaseolus vulgaris
Phvul.011G022500 10.0kb downstream 10.0kb downstream 10000 false Chr11: 1765194-1775193 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301405 5265 Fabidae View MSA
124070138 5270 Rosid View MSA
123750987 5271 Pentapetalae View MSA
122791980 5272 Eudicot View MSA
122045871 5273 Angiosperm View MSA
121350475 5274 Embryophyte View MSA
123428676 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.03922 0.0 3.53404    
cufflinks 2.87602 0.0 8.66974    
cufflinks 0.560781 0.0 2.03514 Low Low
cufflinks 0.174752 0.0 0.690731 Low Low
cufflinks 1.57048 0.0 5.07406    
cufflinks 1.68493 0.0 5.40151    
cufflinks 3.13732 0.0 9.27802    
cufflinks 0.840764 0.0 2.91982    
cufflinks 2.38019 0.0 7.25885    
cufflinks 3.61385 0.0 10.6337    
cufflinks 4.05786 0.0 11.7219   High

0 Strain