Gene : Phvul.011G021500 P. vulgaris v2.1
Defline:  (1 of 1) PTHR23248 - PHOSPHOLIPID SCRAMBLASE-RELATED Genomic Order:  217
Name:  ? Phvul.011G021500 Secondary Identifier:  ? PAC:37154688
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G021500 0.5kb upstream 0.5kb upstream 5594 true Chr11: 1677024-1682617 Phaseolus vulgaris
Phvul.011G021500 0.5kb upstream 0.5kb upstream 500 false Chr11: 1677024-1677523 Phaseolus vulgaris
Phvul.011G021500 0.5kb downstream 0.5kb downstream 5594 true Chr11: 1677524-1683117 Phaseolus vulgaris
Phvul.011G021500 0.5kb downstream 0.5kb downstream 500 false Chr11: 1682618-1683117 Phaseolus vulgaris
Phvul.011G021500 1.0kb upstream 1.0kb upstream 6094 true Chr11: 1676524-1682617 Phaseolus vulgaris
Phvul.011G021500 1.0kb upstream 1.0kb upstream 1000 false Chr11: 1676524-1677523 Phaseolus vulgaris
Phvul.011G021500 1.0kb downstream 1.0kb downstream 6094 true Chr11: 1677524-1683617 Phaseolus vulgaris
Phvul.011G021500 1.0kb downstream 1.0kb downstream 1000 false Chr11: 1682618-1683617 Phaseolus vulgaris
Phvul.011G021500 2.0kb upstream 2.0kb upstream 7094 true Chr11: 1675524-1682617 Phaseolus vulgaris
Phvul.011G021500 2.0kb upstream 2.0kb upstream 2000 false Chr11: 1675524-1677523 Phaseolus vulgaris
Phvul.011G021500 2.0kb downstream 2.0kb downstream 7094 true Chr11: 1677524-1684617 Phaseolus vulgaris
Phvul.011G021500 2.0kb downstream 2.0kb downstream 2000 false Chr11: 1682618-1684617 Phaseolus vulgaris
Phvul.011G021500 5.0kb upstream 5.0kb upstream 10094 true Chr11: 1672524-1682617 Phaseolus vulgaris
Phvul.011G021500 5.0kb upstream 5.0kb upstream 5000 false Chr11: 1672524-1677523 Phaseolus vulgaris
Phvul.011G021500 5.0kb downstream 5.0kb downstream 10094 true Chr11: 1677524-1687617 Phaseolus vulgaris
Phvul.011G021500 5.0kb downstream 5.0kb downstream 5000 false Chr11: 1682618-1687617 Phaseolus vulgaris
Phvul.011G021500 10.0kb upstream 10.0kb upstream 15094 true Chr11: 1667524-1682617 Phaseolus vulgaris
Phvul.011G021500 10.0kb upstream 10.0kb upstream 10000 false Chr11: 1667524-1677523 Phaseolus vulgaris
Phvul.011G021500 10.0kb downstream 10.0kb downstream 15094 true Chr11: 1677524-1692617 Phaseolus vulgaris
Phvul.011G021500 10.0kb downstream 10.0kb downstream 10000 false Chr11: 1682618-1692617 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304933 5265 Fabidae View MSA
124061605 5270 Rosid View MSA
123745510 5271 Pentapetalae View MSA
122771532 5272 Eudicot View MSA
122047662 5273 Angiosperm View MSA
121346746 5274 Embryophyte View MSA
123427032 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.7628 0.0 21.4207   Low
cufflinks 10.5766 0.0 28.5105    
cufflinks 10.2071 0.0 27.5954    
cufflinks 12.0501 0.0 32.263   High
cufflinks 9.63405 0.0 26.2104    
cufflinks 9.1276 0.0 24.8911    
cufflinks 7.96102 0.0 21.9796   Low
cufflinks 8.40272 0.0 23.0479    
cufflinks 7.89448 0.0 21.8668   Low
cufflinks 9.77448 0.0 26.5308    
cufflinks 12.4527 0.0 33.2064   High

0 Strain