Gene : Phvul.011G010000 P. vulgaris v2.1
Defline:  (1 of 1) KOG4443 - Putative transcription factor HALR/MLL3, involved in embryonic development Genomic Order:  101
Name:  ? Phvul.011G010000 Secondary Identifier:  ? PAC:37157318
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G010000 0.5kb upstream 0.5kb upstream 7413 true Chr11: 757687-765099 Phaseolus vulgaris
Phvul.011G010000 0.5kb upstream 0.5kb upstream 500 false Chr11: 757687-758186 Phaseolus vulgaris
Phvul.011G010000 0.5kb downstream 0.5kb downstream 7413 true Chr11: 758187-765599 Phaseolus vulgaris
Phvul.011G010000 0.5kb downstream 0.5kb downstream 500 false Chr11: 765100-765599 Phaseolus vulgaris
Phvul.011G010000 1.0kb upstream 1.0kb upstream 7913 true Chr11: 757187-765099 Phaseolus vulgaris
Phvul.011G010000 1.0kb upstream 1.0kb upstream 1000 false Chr11: 757187-758186 Phaseolus vulgaris
Phvul.011G010000 1.0kb downstream 1.0kb downstream 7913 true Chr11: 758187-766099 Phaseolus vulgaris
Phvul.011G010000 1.0kb downstream 1.0kb downstream 1000 false Chr11: 765100-766099 Phaseolus vulgaris
Phvul.011G010000 2.0kb upstream 2.0kb upstream 8913 true Chr11: 756187-765099 Phaseolus vulgaris
Phvul.011G010000 2.0kb upstream 2.0kb upstream 2000 false Chr11: 756187-758186 Phaseolus vulgaris
Phvul.011G010000 2.0kb downstream 2.0kb downstream 8913 true Chr11: 758187-767099 Phaseolus vulgaris
Phvul.011G010000 2.0kb downstream 2.0kb downstream 2000 false Chr11: 765100-767099 Phaseolus vulgaris
Phvul.011G010000 5.0kb upstream 5.0kb upstream 11913 true Chr11: 753187-765099 Phaseolus vulgaris
Phvul.011G010000 5.0kb upstream 5.0kb upstream 5000 false Chr11: 753187-758186 Phaseolus vulgaris
Phvul.011G010000 5.0kb downstream 5.0kb downstream 11913 true Chr11: 758187-770099 Phaseolus vulgaris
Phvul.011G010000 5.0kb downstream 5.0kb downstream 5000 false Chr11: 765100-770099 Phaseolus vulgaris
Phvul.011G010000 10.0kb upstream 10.0kb upstream 16913 true Chr11: 748187-765099 Phaseolus vulgaris
Phvul.011G010000 10.0kb upstream 10.0kb upstream 10000 false Chr11: 748187-758186 Phaseolus vulgaris
Phvul.011G010000 10.0kb downstream 10.0kb downstream 16913 true Chr11: 758187-775099 Phaseolus vulgaris
Phvul.011G010000 10.0kb downstream 10.0kb downstream 10000 false Chr11: 765100-775099 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301479 5265 Fabidae View MSA
124064827 5270 Rosid View MSA
123748357 5271 Pentapetalae View MSA
122789361 5272 Eudicot View MSA
122043559 5273 Angiosperm View MSA
121347364 5274 Embryophyte View MSA
123380534 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.64739 0.0 7.50713   Low
cufflinks 7.39134 0.0 19.3466    
cufflinks 7.13467 0.0 18.6842    
cufflinks 2.07695 0.0 6.09064   Low
cufflinks 4.56313 0.0 12.409    
cufflinks 10.5234 0.0 27.232   High
cufflinks 6.77887 0.0 17.7902    
cufflinks 7.04541 0.0 18.4333    
cufflinks 5.68884 0.0 15.1173    
cufflinks 7.86809 0.0 20.5421    
cufflinks 5.08304 0.0 13.6634    

0 Strain