Gene : Phvul.011G012000 P. vulgaris v2.1
Defline:  (1 of 2) 1.1.1.3//2.7.2.4 - Aspartate kinase / Aspartokinase Genomic Order:  121
Name:  ? Phvul.011G012000 Secondary Identifier:  ? PAC:37157398
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris HOMOSERSYN-PWY Phaseolus vulgaris pathologic  
Pvulgaris PWY-3001 Phaseolus vulgaris pathologic  
Pvulgaris PWY-5097 Phaseolus vulgaris pathologic  
Pvulgaris PWY-724 Phaseolus vulgaris pathologic  
Pvulgaris THRESYN-PWY Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G012000 0.5kb upstream 0.5kb upstream 15566 true Chr11: 921819-937384 Phaseolus vulgaris
Phvul.011G012000 0.5kb upstream 0.5kb upstream 500 false Chr11: 921819-922318 Phaseolus vulgaris
Phvul.011G012000 0.5kb downstream 0.5kb downstream 15566 true Chr11: 922319-937884 Phaseolus vulgaris
Phvul.011G012000 0.5kb downstream 0.5kb downstream 500 false Chr11: 937385-937884 Phaseolus vulgaris
Phvul.011G012000 1.0kb upstream 1.0kb upstream 16066 true Chr11: 921319-937384 Phaseolus vulgaris
Phvul.011G012000 1.0kb upstream 1.0kb upstream 1000 false Chr11: 921319-922318 Phaseolus vulgaris
Phvul.011G012000 1.0kb downstream 1.0kb downstream 16066 true Chr11: 922319-938384 Phaseolus vulgaris
Phvul.011G012000 1.0kb downstream 1.0kb downstream 1000 false Chr11: 937385-938384 Phaseolus vulgaris
Phvul.011G012000 2.0kb upstream 2.0kb upstream 17066 true Chr11: 920319-937384 Phaseolus vulgaris
Phvul.011G012000 2.0kb upstream 2.0kb upstream 2000 false Chr11: 920319-922318 Phaseolus vulgaris
Phvul.011G012000 2.0kb downstream 2.0kb downstream 17066 true Chr11: 922319-939384 Phaseolus vulgaris
Phvul.011G012000 2.0kb downstream 2.0kb downstream 2000 false Chr11: 937385-939384 Phaseolus vulgaris
Phvul.011G012000 5.0kb upstream 5.0kb upstream 20066 true Chr11: 917319-937384 Phaseolus vulgaris
Phvul.011G012000 5.0kb upstream 5.0kb upstream 5000 false Chr11: 917319-922318 Phaseolus vulgaris
Phvul.011G012000 5.0kb downstream 5.0kb downstream 20066 true Chr11: 922319-942384 Phaseolus vulgaris
Phvul.011G012000 5.0kb downstream 5.0kb downstream 5000 false Chr11: 937385-942384 Phaseolus vulgaris
Phvul.011G012000 10.0kb upstream 10.0kb upstream 25066 true Chr11: 912319-937384 Phaseolus vulgaris
Phvul.011G012000 10.0kb upstream 10.0kb upstream 10000 false Chr11: 912319-922318 Phaseolus vulgaris
Phvul.011G012000 10.0kb downstream 10.0kb downstream 25066 true Chr11: 922319-947384 Phaseolus vulgaris
Phvul.011G012000 10.0kb downstream 10.0kb downstream 10000 false Chr11: 937385-947384 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302703 5265 Fabidae View MSA
124067286 5270 Rosid View MSA
123739285 5271 Pentapetalae View MSA
122788186 5272 Eudicot View MSA
122043013 5273 Angiosperm View MSA
121350238 5274 Embryophyte View MSA
123423775 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.9986 0.0 20.6822   Low
cufflinks 19.4145 0.0 62.4857    
cufflinks 21.4866 0.0 60.8229   High
cufflinks 10.9207 0.0 35.2643    
cufflinks 10.4744 0.0 34.1193    
cufflinks 17.5844 0.0 56.5592    
cufflinks 11.5023 0.0 36.7914    
cufflinks 26.5697 0.0 77.4985   High
cufflinks 14.0019 0.0 45.1108    
cufflinks 14.5519 0.0 41.5242    
cufflinks 9.77321 0.0 31.8455    

0 Strain