Gene : Phvul.011G012400 P. vulgaris v2.1
Defline:  (1 of 1) PTHR10209:SF216 - 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN Genomic Order:  125
Name:  ? Phvul.011G012400 Secondary Identifier:  ? PAC:37154680
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G012400 0.5kb upstream 0.5kb upstream 9005 true Chr11: 958749-967753 Phaseolus vulgaris
Phvul.011G012400 0.5kb upstream 0.5kb upstream 500 false Chr11: 958749-959248 Phaseolus vulgaris
Phvul.011G012400 0.5kb downstream 0.5kb downstream 9005 true Chr11: 959249-968253 Phaseolus vulgaris
Phvul.011G012400 0.5kb downstream 0.5kb downstream 500 false Chr11: 967754-968253 Phaseolus vulgaris
Phvul.011G012400 1.0kb upstream 1.0kb upstream 9505 true Chr11: 958249-967753 Phaseolus vulgaris
Phvul.011G012400 1.0kb upstream 1.0kb upstream 1000 false Chr11: 958249-959248 Phaseolus vulgaris
Phvul.011G012400 1.0kb downstream 1.0kb downstream 9505 true Chr11: 959249-968753 Phaseolus vulgaris
Phvul.011G012400 1.0kb downstream 1.0kb downstream 1000 false Chr11: 967754-968753 Phaseolus vulgaris
Phvul.011G012400 2.0kb upstream 2.0kb upstream 10505 true Chr11: 957249-967753 Phaseolus vulgaris
Phvul.011G012400 2.0kb upstream 2.0kb upstream 2000 false Chr11: 957249-959248 Phaseolus vulgaris
Phvul.011G012400 2.0kb downstream 2.0kb downstream 10505 true Chr11: 959249-969753 Phaseolus vulgaris
Phvul.011G012400 2.0kb downstream 2.0kb downstream 2000 false Chr11: 967754-969753 Phaseolus vulgaris
Phvul.011G012400 5.0kb upstream 5.0kb upstream 13505 true Chr11: 954249-967753 Phaseolus vulgaris
Phvul.011G012400 5.0kb upstream 5.0kb upstream 5000 false Chr11: 954249-959248 Phaseolus vulgaris
Phvul.011G012400 5.0kb downstream 5.0kb downstream 13505 true Chr11: 959249-972753 Phaseolus vulgaris
Phvul.011G012400 5.0kb downstream 5.0kb downstream 5000 false Chr11: 967754-972753 Phaseolus vulgaris
Phvul.011G012400 10.0kb upstream 10.0kb upstream 18505 true Chr11: 949249-967753 Phaseolus vulgaris
Phvul.011G012400 10.0kb upstream 10.0kb upstream 10000 false Chr11: 949249-959248 Phaseolus vulgaris
Phvul.011G012400 10.0kb downstream 10.0kb downstream 18505 true Chr11: 959249-977753 Phaseolus vulgaris
Phvul.011G012400 10.0kb downstream 10.0kb downstream 10000 false Chr11: 967754-977753 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307589 5265 Fabidae View MSA
124069056 5270 Rosid View MSA
123738398 5271 Pentapetalae View MSA
122787492 5272 Eudicot View MSA
122045457 5273 Angiosperm View MSA
121347925 5274 Embryophyte View MSA
123428862 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.69988 0.0 19.2787   High
cufflinks 2.99624 0.0 9.48383    
cufflinks 2.05043 0.0 6.73594    
cufflinks 4.57729 0.0 13.8475    
cufflinks 0.686941 0.0 2.54453   Low
cufflinks 2.13545 0.0 7.01658    
cufflinks 3.67424 0.0 11.3894    
cufflinks 3.40501 0.0 10.5973    
cufflinks 2.51881 0.0 8.16124    
cufflinks 9.49938 0.0 26.5365   High
cufflinks 1.53047 0.0 5.25101    

0 Strain