Gene : Phvul.011G012500 P. vulgaris v2.1
Defline:  (1 of 1) PTHR33102:SF12 - DVL10 Genomic Order:  126
Name:  ? Phvul.011G012500 Secondary Identifier:  ? PAC:37156589
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G012500 0.5kb upstream 0.5kb upstream 1616 true Chr11: 969564-971179 Phaseolus vulgaris
Phvul.011G012500 0.5kb upstream 0.5kb upstream 500 false Chr11: 969564-970063 Phaseolus vulgaris
Phvul.011G012500 0.5kb downstream 0.5kb downstream 1616 true Chr11: 970064-971679 Phaseolus vulgaris
Phvul.011G012500 0.5kb downstream 0.5kb downstream 500 false Chr11: 971180-971679 Phaseolus vulgaris
Phvul.011G012500 1.0kb upstream 1.0kb upstream 2116 true Chr11: 969064-971179 Phaseolus vulgaris
Phvul.011G012500 1.0kb upstream 1.0kb upstream 1000 false Chr11: 969064-970063 Phaseolus vulgaris
Phvul.011G012500 1.0kb downstream 1.0kb downstream 2116 true Chr11: 970064-972179 Phaseolus vulgaris
Phvul.011G012500 1.0kb downstream 1.0kb downstream 1000 false Chr11: 971180-972179 Phaseolus vulgaris
Phvul.011G012500 2.0kb upstream 2.0kb upstream 3116 true Chr11: 968064-971179 Phaseolus vulgaris
Phvul.011G012500 2.0kb upstream 2.0kb upstream 2000 false Chr11: 968064-970063 Phaseolus vulgaris
Phvul.011G012500 2.0kb downstream 2.0kb downstream 3116 true Chr11: 970064-973179 Phaseolus vulgaris
Phvul.011G012500 2.0kb downstream 2.0kb downstream 2000 false Chr11: 971180-973179 Phaseolus vulgaris
Phvul.011G012500 5.0kb upstream 5.0kb upstream 6116 true Chr11: 965064-971179 Phaseolus vulgaris
Phvul.011G012500 5.0kb upstream 5.0kb upstream 5000 false Chr11: 965064-970063 Phaseolus vulgaris
Phvul.011G012500 5.0kb downstream 5.0kb downstream 6116 true Chr11: 970064-976179 Phaseolus vulgaris
Phvul.011G012500 5.0kb downstream 5.0kb downstream 5000 false Chr11: 971180-976179 Phaseolus vulgaris
Phvul.011G012500 10.0kb upstream 10.0kb upstream 11116 true Chr11: 960064-971179 Phaseolus vulgaris
Phvul.011G012500 10.0kb upstream 10.0kb upstream 10000 false Chr11: 960064-970063 Phaseolus vulgaris
Phvul.011G012500 10.0kb downstream 10.0kb downstream 11116 true Chr11: 970064-981179 Phaseolus vulgaris
Phvul.011G012500 10.0kb downstream 10.0kb downstream 10000 false Chr11: 971180-981179 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312004 5265 Fabidae View MSA
124037168 5270 Rosid View MSA
123741879 5271 Pentapetalae View MSA
122796197 5272 Eudicot View MSA
122048565 5273 Angiosperm View MSA
121346075 5274 Embryophyte View MSA
123380321 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.2272 0.0 28.8913   High
cufflinks 2.43238 0.0 8.10027    
cufflinks 0.117214 0.0 0.510873 Low Low
cufflinks 5.89372 0.0 17.9249    
cufflinks 2.77147 0.0 9.11338    
cufflinks 0.177337 0.0 0.745394 Low Low
cufflinks 3.66309 0.0 11.6703    
cufflinks 1.84567 0.0 6.34216    
cufflinks 1.08461 0.0 3.95023    
cufflinks 26.5157 0.0 69.5921   High
cufflinks 1.14888 0.0 4.15206    

0 Strain