Gene : Phvul.011G001700 P. vulgaris v2.1
Defline:  (1 of 1) PTHR23241:SF50 - LATE EMBRYOGENESIS ABUNDANT DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  17
Name:  ? Phvul.011G001700 Secondary Identifier:  ? PAC:37155474
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G001700 0.5kb upstream 0.5kb upstream 2028 true Chr11: 144781-146808 Phaseolus vulgaris
Phvul.011G001700 0.5kb upstream 0.5kb upstream 500 false Chr11: 144781-145280 Phaseolus vulgaris
Phvul.011G001700 0.5kb downstream 0.5kb downstream 2028 true Chr11: 145281-147308 Phaseolus vulgaris
Phvul.011G001700 0.5kb downstream 0.5kb downstream 500 false Chr11: 146809-147308 Phaseolus vulgaris
Phvul.011G001700 1.0kb upstream 1.0kb upstream 2528 true Chr11: 144281-146808 Phaseolus vulgaris
Phvul.011G001700 1.0kb upstream 1.0kb upstream 1000 false Chr11: 144281-145280 Phaseolus vulgaris
Phvul.011G001700 1.0kb downstream 1.0kb downstream 2528 true Chr11: 145281-147808 Phaseolus vulgaris
Phvul.011G001700 1.0kb downstream 1.0kb downstream 1000 false Chr11: 146809-147808 Phaseolus vulgaris
Phvul.011G001700 2.0kb upstream 2.0kb upstream 3528 true Chr11: 143281-146808 Phaseolus vulgaris
Phvul.011G001700 2.0kb upstream 2.0kb upstream 2000 false Chr11: 143281-145280 Phaseolus vulgaris
Phvul.011G001700 2.0kb downstream 2.0kb downstream 3528 true Chr11: 145281-148808 Phaseolus vulgaris
Phvul.011G001700 2.0kb downstream 2.0kb downstream 2000 false Chr11: 146809-148808 Phaseolus vulgaris
Phvul.011G001700 5.0kb upstream 5.0kb upstream 6528 true Chr11: 140281-146808 Phaseolus vulgaris
Phvul.011G001700 5.0kb upstream 5.0kb upstream 5000 false Chr11: 140281-145280 Phaseolus vulgaris
Phvul.011G001700 5.0kb downstream 5.0kb downstream 6528 true Chr11: 145281-151808 Phaseolus vulgaris
Phvul.011G001700 5.0kb downstream 5.0kb downstream 5000 false Chr11: 146809-151808 Phaseolus vulgaris
Phvul.011G001700 10.0kb upstream 10.0kb upstream 11528 true Chr11: 135281-146808 Phaseolus vulgaris
Phvul.011G001700 10.0kb upstream 10.0kb upstream 10000 false Chr11: 135281-145280 Phaseolus vulgaris
Phvul.011G001700 10.0kb downstream 10.0kb downstream 11528 true Chr11: 145281-156808 Phaseolus vulgaris
Phvul.011G001700 10.0kb downstream 10.0kb downstream 10000 false Chr11: 146809-156808 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310946 5265 Fabidae View MSA
124072864 5270 Rosid View MSA
123741808 5271 Pentapetalae View MSA
122794616 5272 Eudicot View MSA
122045721 5273 Angiosperm View MSA
121349691 5274 Embryophyte View MSA
123428296 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.166343 0.0 0.674007 Low  
cufflinks 0.353058 0.0 1.34417 Low  
cufflinks 0.362393 0.0 1.38204 Low  
cufflinks 0.179625 0.0 0.720152 Low  
cufflinks 0.20578 0.0 0.819968 Low  
cufflinks 1.2875 0.0 4.33607   High
cufflinks 0.752897 0.0 2.66143    
cufflinks 0.796667 0.0 2.81508    
cufflinks 0.152109 0.0 0.613913 Low Low
cufflinks 0.149731 0.0 0.611439 Low Low
cufflinks 1.07652 0.0 3.6935   High

0 Strain