Gene : Phvul.011G003800 P. vulgaris v2.1
Defline:  (1 of 1) PTHR11214:SF125 - BETA-1,3-GALACTOSYLTRANSFERASE 8-RELATED Genomic Order:  38
Name:  ? Phvul.011G003800 Secondary Identifier:  ? PAC:37156645
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G003800 0.5kb upstream 0.5kb upstream 3237 true Chr11: 277580-280816 Phaseolus vulgaris
Phvul.011G003800 0.5kb upstream 0.5kb upstream 500 false Chr11: 277580-278079 Phaseolus vulgaris
Phvul.011G003800 0.5kb downstream 0.5kb downstream 3237 true Chr11: 278080-281316 Phaseolus vulgaris
Phvul.011G003800 0.5kb downstream 0.5kb downstream 500 false Chr11: 280817-281316 Phaseolus vulgaris
Phvul.011G003800 1.0kb upstream 1.0kb upstream 3737 true Chr11: 277080-280816 Phaseolus vulgaris
Phvul.011G003800 1.0kb upstream 1.0kb upstream 1000 false Chr11: 277080-278079 Phaseolus vulgaris
Phvul.011G003800 1.0kb downstream 1.0kb downstream 3737 true Chr11: 278080-281816 Phaseolus vulgaris
Phvul.011G003800 1.0kb downstream 1.0kb downstream 1000 false Chr11: 280817-281816 Phaseolus vulgaris
Phvul.011G003800 2.0kb upstream 2.0kb upstream 4737 true Chr11: 276080-280816 Phaseolus vulgaris
Phvul.011G003800 2.0kb upstream 2.0kb upstream 2000 false Chr11: 276080-278079 Phaseolus vulgaris
Phvul.011G003800 2.0kb downstream 2.0kb downstream 4737 true Chr11: 278080-282816 Phaseolus vulgaris
Phvul.011G003800 2.0kb downstream 2.0kb downstream 2000 false Chr11: 280817-282816 Phaseolus vulgaris
Phvul.011G003800 5.0kb upstream 5.0kb upstream 7737 true Chr11: 273080-280816 Phaseolus vulgaris
Phvul.011G003800 5.0kb upstream 5.0kb upstream 5000 false Chr11: 273080-278079 Phaseolus vulgaris
Phvul.011G003800 5.0kb downstream 5.0kb downstream 7737 true Chr11: 278080-285816 Phaseolus vulgaris
Phvul.011G003800 5.0kb downstream 5.0kb downstream 5000 false Chr11: 280817-285816 Phaseolus vulgaris
Phvul.011G003800 10.0kb upstream 10.0kb upstream 12737 true Chr11: 268080-280816 Phaseolus vulgaris
Phvul.011G003800 10.0kb upstream 10.0kb upstream 10000 false Chr11: 268080-278079 Phaseolus vulgaris
Phvul.011G003800 10.0kb downstream 10.0kb downstream 12737 true Chr11: 278080-290816 Phaseolus vulgaris
Phvul.011G003800 10.0kb downstream 10.0kb downstream 10000 false Chr11: 280817-290816 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305779 5265 Fabidae View MSA
124066955 5270 Rosid View MSA
123739966 5271 Pentapetalae View MSA
122785609 5272 Eudicot View MSA
122048102 5273 Angiosperm View MSA
121348547 5274 Embryophyte View MSA
123427932 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.28249 0.0 4.38691   High
cufflinks 0.121995 0.0 0.50903 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.84566 0.0 8.92317   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0278487 0.0 0.134273 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0704156 0.0 0.308327 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0898107 0.0 0.386519 Low  

0 Strain