Gene : Phvul.011G006000 P. vulgaris v2.1
Defline:  (1 of 3) PTHR10788:SF38 - TREHALOSE-PHOSPHATE PHOSPHATASE F-RELATED Genomic Order:  60
Name:  ? Phvul.011G006000 Secondary Identifier:  ? PAC:37156985
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G006000 0.5kb upstream 0.5kb upstream 6079 true Chr11: 445863-451941 Phaseolus vulgaris
Phvul.011G006000 0.5kb upstream 0.5kb upstream 500 false Chr11: 451442-451941 Phaseolus vulgaris
Phvul.011G006000 0.5kb downstream 0.5kb downstream 6079 true Chr11: 445363-451441 Phaseolus vulgaris
Phvul.011G006000 0.5kb downstream 0.5kb downstream 500 false Chr11: 445363-445862 Phaseolus vulgaris
Phvul.011G006000 1.0kb upstream 1.0kb upstream 6579 true Chr11: 445863-452441 Phaseolus vulgaris
Phvul.011G006000 1.0kb upstream 1.0kb upstream 1000 false Chr11: 451442-452441 Phaseolus vulgaris
Phvul.011G006000 1.0kb downstream 1.0kb downstream 6579 true Chr11: 444863-451441 Phaseolus vulgaris
Phvul.011G006000 1.0kb downstream 1.0kb downstream 1000 false Chr11: 444863-445862 Phaseolus vulgaris
Phvul.011G006000 2.0kb upstream 2.0kb upstream 7579 true Chr11: 445863-453441 Phaseolus vulgaris
Phvul.011G006000 2.0kb upstream 2.0kb upstream 2000 false Chr11: 451442-453441 Phaseolus vulgaris
Phvul.011G006000 2.0kb downstream 2.0kb downstream 7579 true Chr11: 443863-451441 Phaseolus vulgaris
Phvul.011G006000 2.0kb downstream 2.0kb downstream 2000 false Chr11: 443863-445862 Phaseolus vulgaris
Phvul.011G006000 5.0kb upstream 5.0kb upstream 10579 true Chr11: 445863-456441 Phaseolus vulgaris
Phvul.011G006000 5.0kb upstream 5.0kb upstream 5000 false Chr11: 451442-456441 Phaseolus vulgaris
Phvul.011G006000 5.0kb downstream 5.0kb downstream 10579 true Chr11: 440863-451441 Phaseolus vulgaris
Phvul.011G006000 5.0kb downstream 5.0kb downstream 5000 false Chr11: 440863-445862 Phaseolus vulgaris
Phvul.011G006000 10.0kb upstream 10.0kb upstream 15579 true Chr11: 445863-461441 Phaseolus vulgaris
Phvul.011G006000 10.0kb upstream 10.0kb upstream 10000 false Chr11: 451442-461441 Phaseolus vulgaris
Phvul.011G006000 10.0kb downstream 10.0kb downstream 15579 true Chr11: 435863-451441 Phaseolus vulgaris
Phvul.011G006000 10.0kb downstream 10.0kb downstream 10000 false Chr11: 435863-445862 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304944 5265 Fabidae View MSA
124065579 5270 Rosid View MSA
123746570 5271 Pentapetalae View MSA
122792974 5272 Eudicot View MSA
122044363 5273 Angiosperm View MSA
121351669 5274 Embryophyte View MSA
123427869 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.48511 0.0 36.4331    
cufflinks 1.20256 0.0 6.62526   Low
cufflinks 49.964 0.0 206.434 High High
cufflinks 15.7562 0.0 62.3614    
cufflinks 7.95332 0.0 32.6845    
cufflinks 12.4016 0.0 48.8547    
cufflinks 5.36428 0.0 22.2462    
cufflinks 3.45551 0.0 19.4662    
cufflinks 5.48959 0.0 24.0114    
cufflinks 0.712307 0.0 5.69716   Low
cufflinks 8.4503 0.0 33.507    

0 Strain