Gene : Phvul.011G005300 P. vulgaris v2.1
Defline:  (1 of 2) PTHR31080:SF19 - PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN Genomic Order:  53
Name:  ? Phvul.011G005300 Secondary Identifier:  ? PAC:37155098
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-1081 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G005300 0.5kb upstream 0.5kb upstream 1786 true Chr11: 384259-386044 Phaseolus vulgaris
Phvul.011G005300 0.5kb upstream 0.5kb upstream 500 false Chr11: 385545-386044 Phaseolus vulgaris
Phvul.011G005300 0.5kb downstream 0.5kb downstream 1786 true Chr11: 383759-385544 Phaseolus vulgaris
Phvul.011G005300 0.5kb downstream 0.5kb downstream 500 false Chr11: 383759-384258 Phaseolus vulgaris
Phvul.011G005300 1.0kb upstream 1.0kb upstream 2286 true Chr11: 384259-386544 Phaseolus vulgaris
Phvul.011G005300 1.0kb upstream 1.0kb upstream 1000 false Chr11: 385545-386544 Phaseolus vulgaris
Phvul.011G005300 1.0kb downstream 1.0kb downstream 2286 true Chr11: 383259-385544 Phaseolus vulgaris
Phvul.011G005300 1.0kb downstream 1.0kb downstream 1000 false Chr11: 383259-384258 Phaseolus vulgaris
Phvul.011G005300 2.0kb upstream 2.0kb upstream 3286 true Chr11: 384259-387544 Phaseolus vulgaris
Phvul.011G005300 2.0kb upstream 2.0kb upstream 2000 false Chr11: 385545-387544 Phaseolus vulgaris
Phvul.011G005300 2.0kb downstream 2.0kb downstream 3286 true Chr11: 382259-385544 Phaseolus vulgaris
Phvul.011G005300 2.0kb downstream 2.0kb downstream 2000 false Chr11: 382259-384258 Phaseolus vulgaris
Phvul.011G005300 5.0kb upstream 5.0kb upstream 6286 true Chr11: 384259-390544 Phaseolus vulgaris
Phvul.011G005300 5.0kb upstream 5.0kb upstream 5000 false Chr11: 385545-390544 Phaseolus vulgaris
Phvul.011G005300 5.0kb downstream 5.0kb downstream 6286 true Chr11: 379259-385544 Phaseolus vulgaris
Phvul.011G005300 5.0kb downstream 5.0kb downstream 5000 false Chr11: 379259-384258 Phaseolus vulgaris
Phvul.011G005300 10.0kb upstream 10.0kb upstream 11286 true Chr11: 384259-395544 Phaseolus vulgaris
Phvul.011G005300 10.0kb upstream 10.0kb upstream 10000 false Chr11: 385545-395544 Phaseolus vulgaris
Phvul.011G005300 10.0kb downstream 10.0kb downstream 11286 true Chr11: 374259-385544 Phaseolus vulgaris
Phvul.011G005300 10.0kb downstream 10.0kb downstream 10000 false Chr11: 374259-384258 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306375 5265 Fabidae View MSA
124061401 5270 Rosid View MSA
123751304 5271 Pentapetalae View MSA
122797599 5272 Eudicot View MSA
122046899 5273 Angiosperm View MSA
121310670 5274 Embryophyte View MSA
123348096 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 278.271 0.0 857.173 High High
cufflinks 1.21829 0.0 4.24236    
cufflinks 66.9458 0.0 176.387 High  
cufflinks 20.5698 0.0 53.8494    
cufflinks 515.396 0.0 1782.68 High High
cufflinks 10.8459 0.0 29.78    
cufflinks 1.43676 0.0 4.89634    
cufflinks 0.0840413 0.0 0.36799 Low Low
cufflinks 10.716 0.0 29.311    
cufflinks 0.095014 0.0 0.412347 Low Low
cufflinks 179.787 0.0 520.434 High  

0 Strain