Gene : Phvul.011G005700 P. vulgaris v2.1
Defline:  (1 of 91) PF02365 - No apical meristem (NAM) protein (NAM) Genomic Order:  57
Name:  ? Phvul.011G005700 Secondary Identifier:  ? PAC:37155005
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G005700 0.5kb upstream 0.5kb upstream 5251 true Chr11: 417219-422469 Phaseolus vulgaris
Phvul.011G005700 0.5kb upstream 0.5kb upstream 500 false Chr11: 417219-417718 Phaseolus vulgaris
Phvul.011G005700 0.5kb downstream 0.5kb downstream 5251 true Chr11: 417719-422969 Phaseolus vulgaris
Phvul.011G005700 0.5kb downstream 0.5kb downstream 500 false Chr11: 422470-422969 Phaseolus vulgaris
Phvul.011G005700 1.0kb upstream 1.0kb upstream 5751 true Chr11: 416719-422469 Phaseolus vulgaris
Phvul.011G005700 1.0kb upstream 1.0kb upstream 1000 false Chr11: 416719-417718 Phaseolus vulgaris
Phvul.011G005700 1.0kb downstream 1.0kb downstream 5751 true Chr11: 417719-423469 Phaseolus vulgaris
Phvul.011G005700 1.0kb downstream 1.0kb downstream 1000 false Chr11: 422470-423469 Phaseolus vulgaris
Phvul.011G005700 2.0kb upstream 2.0kb upstream 6751 true Chr11: 415719-422469 Phaseolus vulgaris
Phvul.011G005700 2.0kb upstream 2.0kb upstream 2000 false Chr11: 415719-417718 Phaseolus vulgaris
Phvul.011G005700 2.0kb downstream 2.0kb downstream 6751 true Chr11: 417719-424469 Phaseolus vulgaris
Phvul.011G005700 2.0kb downstream 2.0kb downstream 2000 false Chr11: 422470-424469 Phaseolus vulgaris
Phvul.011G005700 5.0kb upstream 5.0kb upstream 9751 true Chr11: 412719-422469 Phaseolus vulgaris
Phvul.011G005700 5.0kb upstream 5.0kb upstream 5000 false Chr11: 412719-417718 Phaseolus vulgaris
Phvul.011G005700 5.0kb downstream 5.0kb downstream 9751 true Chr11: 417719-427469 Phaseolus vulgaris
Phvul.011G005700 5.0kb downstream 5.0kb downstream 5000 false Chr11: 422470-427469 Phaseolus vulgaris
Phvul.011G005700 10.0kb upstream 10.0kb upstream 14751 true Chr11: 407719-422469 Phaseolus vulgaris
Phvul.011G005700 10.0kb upstream 10.0kb upstream 10000 false Chr11: 407719-417718 Phaseolus vulgaris
Phvul.011G005700 10.0kb downstream 10.0kb downstream 14751 true Chr11: 417719-432469 Phaseolus vulgaris
Phvul.011G005700 10.0kb downstream 10.0kb downstream 10000 false Chr11: 422470-432469 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122045953 5273 Angiosperm View MSA
122301519 5265 Fabidae View MSA
124069915 5270 Rosid View MSA
123747601 5271 Pentapetalae View MSA
122796785 5272 Eudicot View MSA
121351431 5274 Embryophyte View MSA
123382163 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.198688 0.0 1.63687 Low Low
cufflinks 0.794216 0.0 5.51839    
cufflinks 1.51975 0.0 7.20808    
cufflinks 0.389208 0.0 2.58274 Low  
cufflinks 2.18484 0.0 13.4282    
cufflinks 2.22189 0.0 11.8025    
cufflinks 1.12661 0.0 7.09505    
cufflinks 0.271518 0.0 2.07318 Low  
cufflinks 2.13099 0.0 11.237    
cufflinks 0.0451914 0.0 0.219916 Low Low
cufflinks 3.22749 0.0 15.2856   High

0 Strain