Gene : Phvul.011G073600 P. vulgaris v2.1
Defline:  (1 of 2) PTHR31384:SF20 - AUXIN RESPONSE FACTOR 4 Genomic Order:  757
Name:  ? Phvul.011G073600 Secondary Identifier:  ? PAC:37155086
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G073600 0.5kb upstream 0.5kb upstream 6283 true Chr11: 6795177-6801459 Phaseolus vulgaris
Phvul.011G073600 0.5kb upstream 0.5kb upstream 500 false Chr11: 6800960-6801459 Phaseolus vulgaris
Phvul.011G073600 0.5kb downstream 0.5kb downstream 6283 true Chr11: 6794677-6800959 Phaseolus vulgaris
Phvul.011G073600 0.5kb downstream 0.5kb downstream 500 false Chr11: 6794677-6795176 Phaseolus vulgaris
Phvul.011G073600 1.0kb upstream 1.0kb upstream 6783 true Chr11: 6795177-6801959 Phaseolus vulgaris
Phvul.011G073600 1.0kb upstream 1.0kb upstream 1000 false Chr11: 6800960-6801959 Phaseolus vulgaris
Phvul.011G073600 1.0kb downstream 1.0kb downstream 6783 true Chr11: 6794177-6800959 Phaseolus vulgaris
Phvul.011G073600 1.0kb downstream 1.0kb downstream 1000 false Chr11: 6794177-6795176 Phaseolus vulgaris
Phvul.011G073600 2.0kb upstream 2.0kb upstream 7783 true Chr11: 6795177-6802959 Phaseolus vulgaris
Phvul.011G073600 2.0kb upstream 2.0kb upstream 2000 false Chr11: 6800960-6802959 Phaseolus vulgaris
Phvul.011G073600 2.0kb downstream 2.0kb downstream 7783 true Chr11: 6793177-6800959 Phaseolus vulgaris
Phvul.011G073600 2.0kb downstream 2.0kb downstream 2000 false Chr11: 6793177-6795176 Phaseolus vulgaris
Phvul.011G073600 5.0kb upstream 5.0kb upstream 10783 true Chr11: 6795177-6805959 Phaseolus vulgaris
Phvul.011G073600 5.0kb upstream 5.0kb upstream 5000 false Chr11: 6800960-6805959 Phaseolus vulgaris
Phvul.011G073600 5.0kb downstream 5.0kb downstream 10783 true Chr11: 6790177-6800959 Phaseolus vulgaris
Phvul.011G073600 5.0kb downstream 5.0kb downstream 5000 false Chr11: 6790177-6795176 Phaseolus vulgaris
Phvul.011G073600 10.0kb upstream 10.0kb upstream 15783 true Chr11: 6795177-6810959 Phaseolus vulgaris
Phvul.011G073600 10.0kb upstream 10.0kb upstream 10000 false Chr11: 6800960-6810959 Phaseolus vulgaris
Phvul.011G073600 10.0kb downstream 10.0kb downstream 15783 true Chr11: 6785177-6800959 Phaseolus vulgaris
Phvul.011G073600 10.0kb downstream 10.0kb downstream 10000 false Chr11: 6785177-6795176 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310336 5265 Fabidae View MSA
124066923 5270 Rosid View MSA
123747350 5271 Pentapetalae View MSA
122795169 5272 Eudicot View MSA
122043529 5273 Angiosperm View MSA
121310144 5274 Embryophyte View MSA
123347713 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.20742 0.0 8.30324   Low
cufflinks 8.05372 0.0 23.7684    
cufflinks 8.83976 0.0 26.5188    
cufflinks 5.52273 0.0 17.0801    
cufflinks 11.0829 0.0 35.6785    
cufflinks 6.27338 0.0 19.5062    
cufflinks 5.52069 0.0 19.4302    
cufflinks 6.48594 0.0 22.0784    
cufflinks 6.58075 0.0 22.5664    
cufflinks 15.6738 0.0 45.4204   High
cufflinks 14.8958 0.0 47.3418   High

0 Strain