Gene : Phvul.011G073900 P. vulgaris v2.1
Defline:  (1 of 5) K09481 - protein transport protein SEC61 subunit beta (SEC61B, SBH2) Genomic Order:  761
Name:  ? Phvul.011G073900 Secondary Identifier:  ? PAC:37154636
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G073900 0.5kb upstream 0.5kb upstream 1265 true Chr11: 6879030-6880294 Phaseolus vulgaris
Phvul.011G073900 0.5kb upstream 0.5kb upstream 500 false Chr11: 6879030-6879529 Phaseolus vulgaris
Phvul.011G073900 0.5kb downstream 0.5kb downstream 1265 true Chr11: 6879530-6880794 Phaseolus vulgaris
Phvul.011G073900 0.5kb downstream 0.5kb downstream 500 false Chr11: 6880295-6880794 Phaseolus vulgaris
Phvul.011G073900 1.0kb upstream 1.0kb upstream 1765 true Chr11: 6878530-6880294 Phaseolus vulgaris
Phvul.011G073900 1.0kb upstream 1.0kb upstream 1000 false Chr11: 6878530-6879529 Phaseolus vulgaris
Phvul.011G073900 1.0kb downstream 1.0kb downstream 1765 true Chr11: 6879530-6881294 Phaseolus vulgaris
Phvul.011G073900 1.0kb downstream 1.0kb downstream 1000 false Chr11: 6880295-6881294 Phaseolus vulgaris
Phvul.011G073900 2.0kb upstream 2.0kb upstream 2765 true Chr11: 6877530-6880294 Phaseolus vulgaris
Phvul.011G073900 2.0kb upstream 2.0kb upstream 2000 false Chr11: 6877530-6879529 Phaseolus vulgaris
Phvul.011G073900 2.0kb downstream 2.0kb downstream 2765 true Chr11: 6879530-6882294 Phaseolus vulgaris
Phvul.011G073900 2.0kb downstream 2.0kb downstream 2000 false Chr11: 6880295-6882294 Phaseolus vulgaris
Phvul.011G073900 5.0kb upstream 5.0kb upstream 5765 true Chr11: 6874530-6880294 Phaseolus vulgaris
Phvul.011G073900 5.0kb upstream 5.0kb upstream 5000 false Chr11: 6874530-6879529 Phaseolus vulgaris
Phvul.011G073900 5.0kb downstream 5.0kb downstream 5765 true Chr11: 6879530-6885294 Phaseolus vulgaris
Phvul.011G073900 5.0kb downstream 5.0kb downstream 5000 false Chr11: 6880295-6885294 Phaseolus vulgaris
Phvul.011G073900 10.0kb upstream 10.0kb upstream 10765 true Chr11: 6869530-6880294 Phaseolus vulgaris
Phvul.011G073900 10.0kb upstream 10.0kb upstream 10000 false Chr11: 6869530-6879529 Phaseolus vulgaris
Phvul.011G073900 10.0kb downstream 10.0kb downstream 10765 true Chr11: 6879530-6890294 Phaseolus vulgaris
Phvul.011G073900 10.0kb downstream 10.0kb downstream 10000 false Chr11: 6880295-6890294 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314120 5265 Fabidae View MSA
124074304 5270 Rosid View MSA
123751679 5271 Pentapetalae View MSA
122797593 5272 Eudicot View MSA
122044826 5273 Angiosperm View MSA
121346729 5274 Embryophyte View MSA
123426765 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.28754 0.0 11.146    
cufflinks 1.74213 0.0 6.32069    
cufflinks 6.42115 0.0 20.5048    
cufflinks 11.8301 0.0 34.2243   High
cufflinks 6.12748 0.0 19.2961    
cufflinks 3.15471 0.0 10.8261    
cufflinks 2.32547 0.0 8.15467    
cufflinks 1.92536 0.0 6.95087    
cufflinks 11.0563 0.0 32.5345   High
cufflinks 0.23173 0.0 0.98846 Low Low
cufflinks 3.83042 0.0 12.6774    

0 Strain