Gene : Phvul.011G074250 P. vulgaris v2.1
Defline:  (1 of 25) PTHR32077:SF7 - FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 11 Genomic Order:  765
Name:  ? Phvul.011G074250 Secondary Identifier:  ? PAC:37155190
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G074250 0.5kb upstream 0.5kb upstream 1585 true Chr11: 6927693-6929277 Phaseolus vulgaris
Phvul.011G074250 0.5kb upstream 0.5kb upstream 500 false Chr11: 6928778-6929277 Phaseolus vulgaris
Phvul.011G074250 0.5kb downstream 0.5kb downstream 1585 true Chr11: 6927193-6928777 Phaseolus vulgaris
Phvul.011G074250 0.5kb downstream 0.5kb downstream 500 false Chr11: 6927193-6927692 Phaseolus vulgaris
Phvul.011G074250 1.0kb upstream 1.0kb upstream 2085 true Chr11: 6927693-6929777 Phaseolus vulgaris
Phvul.011G074250 1.0kb upstream 1.0kb upstream 1000 false Chr11: 6928778-6929777 Phaseolus vulgaris
Phvul.011G074250 1.0kb downstream 1.0kb downstream 2085 true Chr11: 6926693-6928777 Phaseolus vulgaris
Phvul.011G074250 1.0kb downstream 1.0kb downstream 1000 false Chr11: 6926693-6927692 Phaseolus vulgaris
Phvul.011G074250 2.0kb upstream 2.0kb upstream 3085 true Chr11: 6927693-6930777 Phaseolus vulgaris
Phvul.011G074250 2.0kb upstream 2.0kb upstream 2000 false Chr11: 6928778-6930777 Phaseolus vulgaris
Phvul.011G074250 2.0kb downstream 2.0kb downstream 3085 true Chr11: 6925693-6928777 Phaseolus vulgaris
Phvul.011G074250 2.0kb downstream 2.0kb downstream 2000 false Chr11: 6925693-6927692 Phaseolus vulgaris
Phvul.011G074250 5.0kb upstream 5.0kb upstream 6085 true Chr11: 6927693-6933777 Phaseolus vulgaris
Phvul.011G074250 5.0kb upstream 5.0kb upstream 5000 false Chr11: 6928778-6933777 Phaseolus vulgaris
Phvul.011G074250 5.0kb downstream 5.0kb downstream 6085 true Chr11: 6922693-6928777 Phaseolus vulgaris
Phvul.011G074250 5.0kb downstream 5.0kb downstream 5000 false Chr11: 6922693-6927692 Phaseolus vulgaris
Phvul.011G074250 10.0kb upstream 10.0kb upstream 11085 true Chr11: 6927693-6938777 Phaseolus vulgaris
Phvul.011G074250 10.0kb upstream 10.0kb upstream 10000 false Chr11: 6928778-6938777 Phaseolus vulgaris
Phvul.011G074250 10.0kb downstream 10.0kb downstream 11085 true Chr11: 6917693-6928777 Phaseolus vulgaris
Phvul.011G074250 10.0kb downstream 10.0kb downstream 10000 false Chr11: 6917693-6927692 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122031651 5273 Angiosperm View MSA
122297659 5265 Fabidae View MSA
124075064 5270 Rosid View MSA
123628735 5271 Pentapetalae View MSA
122662989 5272 Eudicot View MSA
121300660 5274 Embryophyte View MSA
123338397 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0811811 0.0 0.369764 Low Low
cufflinks 0.13316 0.0 0.577444 Low Low
cufflinks 0.213008 0.0 0.88322 Low  
cufflinks 0.218289 0.0 0.903901 Low  
cufflinks 3.29045 0.0 10.7362    
cufflinks 1.33269 0.0 4.7549    
cufflinks 9.29852 0.0 26.6937   High
cufflinks 1.37628 0.0 4.89307    
cufflinks 3.50859 0.0 11.245    
cufflinks 0.235174 0.0 0.972975 Low  
cufflinks 39.3785 0.0 102.193 High High

0 Strain