Gene : Phvul.011G074200 P. vulgaris v2.1
Defline:  (1 of 25) PTHR32077:SF7 - FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 11 Genomic Order:  764
Name:  ? Phvul.011G074200 Secondary Identifier:  ? PAC:37155254
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G074200 0.5kb upstream 0.5kb upstream 1373 true Chr11: 6921838-6923210 Phaseolus vulgaris
Phvul.011G074200 0.5kb upstream 0.5kb upstream 500 false Chr11: 6922711-6923210 Phaseolus vulgaris
Phvul.011G074200 0.5kb downstream 0.5kb downstream 1373 true Chr11: 6921338-6922710 Phaseolus vulgaris
Phvul.011G074200 0.5kb downstream 0.5kb downstream 500 false Chr11: 6921338-6921837 Phaseolus vulgaris
Phvul.011G074200 1.0kb upstream 1.0kb upstream 1873 true Chr11: 6921838-6923710 Phaseolus vulgaris
Phvul.011G074200 1.0kb upstream 1.0kb upstream 1000 false Chr11: 6922711-6923710 Phaseolus vulgaris
Phvul.011G074200 1.0kb downstream 1.0kb downstream 1873 true Chr11: 6920838-6922710 Phaseolus vulgaris
Phvul.011G074200 1.0kb downstream 1.0kb downstream 1000 false Chr11: 6920838-6921837 Phaseolus vulgaris
Phvul.011G074200 2.0kb upstream 2.0kb upstream 2873 true Chr11: 6921838-6924710 Phaseolus vulgaris
Phvul.011G074200 2.0kb upstream 2.0kb upstream 2000 false Chr11: 6922711-6924710 Phaseolus vulgaris
Phvul.011G074200 2.0kb downstream 2.0kb downstream 2873 true Chr11: 6919838-6922710 Phaseolus vulgaris
Phvul.011G074200 2.0kb downstream 2.0kb downstream 2000 false Chr11: 6919838-6921837 Phaseolus vulgaris
Phvul.011G074200 5.0kb upstream 5.0kb upstream 5873 true Chr11: 6921838-6927710 Phaseolus vulgaris
Phvul.011G074200 5.0kb upstream 5.0kb upstream 5000 false Chr11: 6922711-6927710 Phaseolus vulgaris
Phvul.011G074200 5.0kb downstream 5.0kb downstream 5873 true Chr11: 6916838-6922710 Phaseolus vulgaris
Phvul.011G074200 5.0kb downstream 5.0kb downstream 5000 false Chr11: 6916838-6921837 Phaseolus vulgaris
Phvul.011G074200 10.0kb upstream 10.0kb upstream 10873 true Chr11: 6921838-6932710 Phaseolus vulgaris
Phvul.011G074200 10.0kb upstream 10.0kb upstream 10000 false Chr11: 6922711-6932710 Phaseolus vulgaris
Phvul.011G074200 10.0kb downstream 10.0kb downstream 10873 true Chr11: 6911838-6922710 Phaseolus vulgaris
Phvul.011G074200 10.0kb downstream 10.0kb downstream 10000 false Chr11: 6911838-6921837 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122031651 5273 Angiosperm View MSA
122297659 5265 Fabidae View MSA
124075064 5270 Rosid View MSA
123628735 5271 Pentapetalae View MSA
122662989 5272 Eudicot View MSA
121300660 5274 Embryophyte View MSA
123338397 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.042174 0.0 0.211545 Low Low
cufflinks 0.127954 0.0 0.572267 Low  
cufflinks 0.186771 0.0 0.802886 Low  
cufflinks 0.185323 0.0 0.79694 Low  
cufflinks 3.02445 0.0 10.2743    
cufflinks 0.939431 0.0 3.54197    
cufflinks 9.41647 0.0 27.8586   High
cufflinks 1.09536 0.0 4.08278    
cufflinks 3.07423 0.0 10.3302    
cufflinks 0.176775 0.0 0.769394 Low  
cufflinks 36.4479 0.0 96.0917 High High

0 Strain