Gene : Phvul.011G074500 P. vulgaris v2.1
Defline:  (1 of 25) PTHR32077:SF7 - FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 11 Genomic Order:  768
Name:  ? Phvul.011G074500 Secondary Identifier:  ? PAC:37156712
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G074500 0.5kb upstream 0.5kb upstream 1343 true Chr11: 6953835-6955177 Phaseolus vulgaris
Phvul.011G074500 0.5kb upstream 0.5kb upstream 500 false Chr11: 6954678-6955177 Phaseolus vulgaris
Phvul.011G074500 0.5kb downstream 0.5kb downstream 1343 true Chr11: 6953335-6954677 Phaseolus vulgaris
Phvul.011G074500 0.5kb downstream 0.5kb downstream 500 false Chr11: 6953335-6953834 Phaseolus vulgaris
Phvul.011G074500 1.0kb upstream 1.0kb upstream 1843 true Chr11: 6953835-6955677 Phaseolus vulgaris
Phvul.011G074500 1.0kb upstream 1.0kb upstream 1000 false Chr11: 6954678-6955677 Phaseolus vulgaris
Phvul.011G074500 1.0kb downstream 1.0kb downstream 1843 true Chr11: 6952835-6954677 Phaseolus vulgaris
Phvul.011G074500 1.0kb downstream 1.0kb downstream 1000 false Chr11: 6952835-6953834 Phaseolus vulgaris
Phvul.011G074500 2.0kb upstream 2.0kb upstream 2843 true Chr11: 6953835-6956677 Phaseolus vulgaris
Phvul.011G074500 2.0kb upstream 2.0kb upstream 2000 false Chr11: 6954678-6956677 Phaseolus vulgaris
Phvul.011G074500 2.0kb downstream 2.0kb downstream 2843 true Chr11: 6951835-6954677 Phaseolus vulgaris
Phvul.011G074500 2.0kb downstream 2.0kb downstream 2000 false Chr11: 6951835-6953834 Phaseolus vulgaris
Phvul.011G074500 5.0kb upstream 5.0kb upstream 5843 true Chr11: 6953835-6959677 Phaseolus vulgaris
Phvul.011G074500 5.0kb upstream 5.0kb upstream 5000 false Chr11: 6954678-6959677 Phaseolus vulgaris
Phvul.011G074500 5.0kb downstream 5.0kb downstream 5843 true Chr11: 6948835-6954677 Phaseolus vulgaris
Phvul.011G074500 5.0kb downstream 5.0kb downstream 5000 false Chr11: 6948835-6953834 Phaseolus vulgaris
Phvul.011G074500 10.0kb upstream 10.0kb upstream 10843 true Chr11: 6953835-6964677 Phaseolus vulgaris
Phvul.011G074500 10.0kb upstream 10.0kb upstream 10000 false Chr11: 6954678-6964677 Phaseolus vulgaris
Phvul.011G074500 10.0kb downstream 10.0kb downstream 10843 true Chr11: 6943835-6954677 Phaseolus vulgaris
Phvul.011G074500 10.0kb downstream 10.0kb downstream 10000 false Chr11: 6943835-6953834 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297718 5265 Fabidae View MSA
124062228 5270 Rosid View MSA
123750165 5271 Pentapetalae View MSA
122791630 5272 Eudicot View MSA
122047379 5273 Angiosperm View MSA
121351509 5274 Embryophyte View MSA
123426561 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.057946 0.0 0.281363 Low Low
cufflinks 0.630145 0.0 2.46538    
cufflinks 0.552197 0.0 2.17655 Low  
cufflinks 2.99038 0.0 10.0318    
cufflinks 11.1146 0.0 32.4894    
cufflinks 0.33096 0.0 1.36128 Low  
cufflinks 19.6659 0.0 54.1612   High
cufflinks 2.49707 0.0 8.61669    
cufflinks 10.5114 0.0 30.7636    
cufflinks 0.0277645 0.0 0.147672 Low Low
cufflinks 71.1818 0.0 183.993 High High

0 Strain