Gene : Phvul.011G074400 P. vulgaris v2.1
Defline:  (1 of 25) PTHR32077:SF7 - FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 11 Genomic Order:  767
Name:  ? Phvul.011G074400 Secondary Identifier:  ? PAC:37157158
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G074400 0.5kb upstream 0.5kb upstream 1367 true Chr11: 6950781-6952147 Phaseolus vulgaris
Phvul.011G074400 0.5kb upstream 0.5kb upstream 500 false Chr11: 6951648-6952147 Phaseolus vulgaris
Phvul.011G074400 0.5kb downstream 0.5kb downstream 1367 true Chr11: 6950281-6951647 Phaseolus vulgaris
Phvul.011G074400 0.5kb downstream 0.5kb downstream 500 false Chr11: 6950281-6950780 Phaseolus vulgaris
Phvul.011G074400 1.0kb upstream 1.0kb upstream 1867 true Chr11: 6950781-6952647 Phaseolus vulgaris
Phvul.011G074400 1.0kb upstream 1.0kb upstream 1000 false Chr11: 6951648-6952647 Phaseolus vulgaris
Phvul.011G074400 1.0kb downstream 1.0kb downstream 1867 true Chr11: 6949781-6951647 Phaseolus vulgaris
Phvul.011G074400 1.0kb downstream 1.0kb downstream 1000 false Chr11: 6949781-6950780 Phaseolus vulgaris
Phvul.011G074400 2.0kb upstream 2.0kb upstream 2867 true Chr11: 6950781-6953647 Phaseolus vulgaris
Phvul.011G074400 2.0kb upstream 2.0kb upstream 2000 false Chr11: 6951648-6953647 Phaseolus vulgaris
Phvul.011G074400 2.0kb downstream 2.0kb downstream 2867 true Chr11: 6948781-6951647 Phaseolus vulgaris
Phvul.011G074400 2.0kb downstream 2.0kb downstream 2000 false Chr11: 6948781-6950780 Phaseolus vulgaris
Phvul.011G074400 5.0kb upstream 5.0kb upstream 5867 true Chr11: 6950781-6956647 Phaseolus vulgaris
Phvul.011G074400 5.0kb upstream 5.0kb upstream 5000 false Chr11: 6951648-6956647 Phaseolus vulgaris
Phvul.011G074400 5.0kb downstream 5.0kb downstream 5867 true Chr11: 6945781-6951647 Phaseolus vulgaris
Phvul.011G074400 5.0kb downstream 5.0kb downstream 5000 false Chr11: 6945781-6950780 Phaseolus vulgaris
Phvul.011G074400 10.0kb upstream 10.0kb upstream 10867 true Chr11: 6950781-6961647 Phaseolus vulgaris
Phvul.011G074400 10.0kb upstream 10.0kb upstream 10000 false Chr11: 6951648-6961647 Phaseolus vulgaris
Phvul.011G074400 10.0kb downstream 10.0kb downstream 10867 true Chr11: 6940781-6951647 Phaseolus vulgaris
Phvul.011G074400 10.0kb downstream 10.0kb downstream 10000 false Chr11: 6940781-6950780 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122031651 5273 Angiosperm View MSA
122297659 5265 Fabidae View MSA
124075064 5270 Rosid View MSA
123628735 5271 Pentapetalae View MSA
122662989 5272 Eudicot View MSA
121300660 5274 Embryophyte View MSA
123338397 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.308506 0.0 1.28726 Low  
cufflinks 0.276853 0.0 1.16242 Low  
cufflinks 0.0935696 0.0 0.434644 Low Low
cufflinks 10.6077 0.0 31.5689    
cufflinks 0.554441 0.0 2.204    
cufflinks 26.7801 0.0 72.5883   High
cufflinks 4.42403 0.0 14.5084    
cufflinks 8.07441 0.0 24.6485    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 90.905 0.0 235.197 High High

0 Strain